Gene Dred_0412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0412 
Symbol 
ID4956143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp454527 
End bp454910 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content41% 
IMG OID640179584 
Productputative endoribonuclease L-PSP 
Protein accessionYP_001111785 
Protein GI134298289 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID[TIGR00004] endoribonuclease L-PSP, putative 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAAA AAATTATTAA AACCCAAAAT GCCCCGGGGG CAATTGGACC CTATTCACAG 
GCGACATTGG TAGGAGATTT TTTGTTTGTA TCGGGACAGC TTCCCATTAA TCCTGAGAAT
GGTCAAATGC CGGATGGAGA TGTTCAAGCA CAAACCCGTC AAAGTATTAA AAACATTAAA
GGCATTATTG AAGCAGCTGG TGGAACCTTG CAAAATGTGG TGAAAACTAC TGTGTTTTTA
AAAGATATGA ATGAGTTTGC CTTAATGAAT GAAGTATATG CGGAATTTTT CTCAGAAAAT
CCTCCTGCCA GAGCTGCGGT AGAGGTTGCC AGGTTGCCAA AGGATGCTCG AGTGGAAATT
GAAGCTGTTG TATATCTGGG TTAG
 
Protein sequence
MTKKIIKTQN APGAIGPYSQ ATLVGDFLFV SGQLPINPEN GQMPDGDVQA QTRQSIKNIK 
GIIEAAGGTL QNVVKTTVFL KDMNEFALMN EVYAEFFSEN PPARAAVEVA RLPKDARVEI
EAVVYLG