| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0409 |
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| Symbol | |
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| ID | 4955319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 450336 |
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| End bp | 451619 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640179581 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_001111782 |
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| Protein GI | 134298286 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACTATAG CACTAGTATT TATATCACTA GCTATATTTT TACTGTTAAG TATACCTATT
GGTATTTCTA TTGGACTAAG TGTCCTGGTC GGTATGATTG TTGGTCAAGA TTTGCCTACA
GCATTTTTAA TTCAGAAAAT GATTGCTTCA CTTGATTCTT TTCCCCTACT AGCGGTTCCT
TTCTTTATTA TGGCCGGTGA AATTATGCAA AAAGGTAGTA TGGCCCAGAG ACTGTTAGCT
GTATCTAGGA CTTTAGTTGG TCATATTACG GGTGGTATGG CTCATATTTC GGTTCTTACG
TGTATGTTTT ACGGTGCTCT AAGTGGTTCA GCCCCTGCAA CAGTAGCGGC GGTTGGCGGA
ATTATGATAC CGAGCATGGA AAAAGAAGGA TATGACAAAC CCTTTTCAAC TGCCGTAAAT
ACTGCAGCTG GCTGTTTAGG TGTAATGATT CCACCAAGTG TTCCTCTAAT TATTTATGGC
ACTACTGCTG GAGTATCTGT AGGGGATCTC TTTATTGCAG GAGTAATTCC CGGACTCTTT
GTTGGCATGT TCTTGATGGC AACCAGTTAT ATTATTTCAA AGAAAAAAGG TTATAAAGGT
AGCGGACAAC GTAGTAACTT TAAAGACATG TTAAAAGCAC TTAATGAAGC TAAGTTTGCT
TTAGTAGTTC CAGTTATTGT ACTTGGTGGT ATTTATGGTG GTTTAACAAC ACCTACTGAG
GCAGGGGTTA TCGCAGTTAT TTATGCTTTC TTAGCAGAAG GATTTATTCA TCGTGCTCTT
AATTGGTCTA AAGTTTATGA AGTAATCAGA GGATCTGCCT TAACTACTGC CTCTATTTTC
TTGGTGGTAG CTACTGCTAC AGGTTTAGGT CAAATCCTGA TGTTTTATAA TGTGCCAGAT
TTGTTGGTGA ACTTTTTAGT AGGAATTTCC GAGAATAAGT ATGTACTAAT GCCTATCATC
CTTCTTTTTC TCGTGGTAAT GGGTACCTTC ATGGATGCAC TTGCTAACAT TTTAATTTTA
ACCCCATTAC TTCTTCCTGT TGTTCAGAAA ATTGGAATTG ACCCGGTTCA CTTCGGGATA
GTAATGATAG TTGTTATATC AATGGGCTTT TTAACACCTC CGGTAGGGGT AAACTTATTT
GTGGGCTGTG GTATTAGTAA GTTGAGAATT GAGGTACTAA GCAAAGCTGT AATACCATTC
TTGATTGCTA TGTTTATTGC CGTATTGGCC TTGGCTTTTA TACCCCAAAT AACGCTTTGG
TTACCTAGCT TAATGGTAAG CTAA
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| Protein sequence | MTIALVFISL AIFLLLSIPI GISIGLSVLV GMIVGQDLPT AFLIQKMIAS LDSFPLLAVP
FFIMAGEIMQ KGSMAQRLLA VSRTLVGHIT GGMAHISVLT CMFYGALSGS APATVAAVGG
IMIPSMEKEG YDKPFSTAVN TAAGCLGVMI PPSVPLIIYG TTAGVSVGDL FIAGVIPGLF
VGMFLMATSY IISKKKGYKG SGQRSNFKDM LKALNEAKFA LVVPVIVLGG IYGGLTTPTE
AGVIAVIYAF LAEGFIHRAL NWSKVYEVIR GSALTTASIF LVVATATGLG QILMFYNVPD
LLVNFLVGIS ENKYVLMPII LLFLVVMGTF MDALANILIL TPLLLPVVQK IGIDPVHFGI
VMIVVISMGF LTPPVGVNLF VGCGISKLRI EVLSKAVIPF LIAMFIAVLA LAFIPQITLW
LPSLMVS
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