| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0407 |
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| Symbol | |
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| ID | 4956046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 448685 |
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| End bp | 449725 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640179579 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_001111780 |
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| Protein GI | 134298284 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAAAA TAACAAAAAT GTTTTCTTTA ATGTTGATAT TAGTATTCGG TGTGTTTTCT
CTGGTTGGCT GTACTTCTGG TGGTAAAGAA CAAGCTGGTG GAGACAAAGC TAAGGAGTCT
GAACCTGTTG TAATCAAATT AGCACACGAG AACGTACCCA AACATCCCAT GGGACAAGCT
TTTATTAAGT TTAAAGAGCT GGTTGAAAGC CGTAGTAATG GAGCAATAAA AGTAGACCTT
TATGATAGTG GTAAATTTGG TAATGCTCGT GAAATTGTAG AAGGTCTACA AACTGGCCAA
ATCCAGATGG GATCTTCATC AACTCCAAAC TTAGCTCCCT TTTCTAAGGA TTTTCTAATT
TATGATTTAC CATTTTTATT CCCGGATTAT GAGTCTACAG ATAAAGTTAC TGATGGTCCT
ATCGGTAAAA AAGCTGCTGC TGCATTAGAA TCCAGTAACA TTAAAGGCTT AGGTTATATT
GAAATTGGCT TCCGTCATAT TTTTAACAAT GCTAAACCTG TAAATACAAT GGCTGATCTT
AAAGGTTTAA AAATTCGCTC CACTGCCAGT AAGGCTCACA TTGCCACATT GAAAGGTTTA
GGCGCTAACC CAACTCCAGT AGCCTGGGGA GAAGTATATA CCGCTTTACA ACAGAAAACT
GTTGATGGTA TTGATATTGA CTTAAACTTA GCATGGTTTA ACAATTTCCA AGAAGTAAAT
AAAAATTTAA CCTTAGTAAA CAGTATATAC AGTCCTCACT TGGTAATGAT TAATAAAGCA
TTTTTTGAAA AATTAACTCC AGAAAATCAG AAGATTGTTA CCGAGGCCTT TGAAGAAATC
AAAGTATATG AACGTAAATT GATTCGTGAC AATGAAAAAA TGATCATTGG TAAAATGAAA
GAAGCAGGTG TTAATGTAGT AGAGTTAACT CCAGAAGAAA GACAAAAGTG GGCAGATGCC
ACTGCTGGTG TGTATGATGA ATTTGGCGGT GACATTGGTA AAGATCTGAT TGAACAGGTT
AGGGAAACAG TAAAGAAATA G
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| Protein sequence | MSKITKMFSL MLILVFGVFS LVGCTSGGKE QAGGDKAKES EPVVIKLAHE NVPKHPMGQA
FIKFKELVES RSNGAIKVDL YDSGKFGNAR EIVEGLQTGQ IQMGSSSTPN LAPFSKDFLI
YDLPFLFPDY ESTDKVTDGP IGKKAAAALE SSNIKGLGYI EIGFRHIFNN AKPVNTMADL
KGLKIRSTAS KAHIATLKGL GANPTPVAWG EVYTALQQKT VDGIDIDLNL AWFNNFQEVN
KNLTLVNSIY SPHLVMINKA FFEKLTPENQ KIVTEAFEEI KVYERKLIRD NEKMIIGKMK
EAGVNVVELT PEERQKWADA TAGVYDEFGG DIGKDLIEQV RETVKK
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