| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0400 |
|---|
| Symbol | |
|---|
| ID | 4957983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 435752 |
|---|
| End bp | 436930 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640179569 |
|---|
| Product | acetyl-CoA acetyltransferase |
|---|
| Protein accession | YP_001111773 |
|---|
| Protein GI | 134298277 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGAAA CTGTAATAGT GAGTGCAGCA AGAACGCCCT TTGGCCGATT CGGTGGCGGA
CTAAAGTCAC TAAAGGCTGT GGATCTTGGA GGGATAGCCA TTGCTGAAGC AATCAGACGT
GCTGGTGTAT CCTCTGAGCA AATTGACTAC GTCTATATGG GTCAAGTTCT CCAGGGTGGA
TGCGGTCAAG TTCCATCTCG TCAGGCAACC CGCAAGGCAG GTTTGCCATG GGAAGTTCCA
TCGATAACAG TAAATAAGGT TTGTTCCTCT GGGTTAATTA CCGTATCATT AGCCGATAAA
GCAATTCGGC TGGGTGAAAT AGATATTGCG GTTGCAGGCG GTATGGAAAG CATGAGCAAT
GCGCCCTATT TTCTGCCCGG TATGCGTTGG GGTTCCCGTA TGATGAATTC AAGTGCTGTG
GATCTGATGG TTAATGATGG GCTTTGGTGC TCGTTCTATG ATAGACATAT GGCTATTCAT
GGATCAGAGG TAGCTAGTGA ATTTGGCTTG AGTCGGGAAG CTCAGGATGA GTGGGCATTG
CGGAGCCAAT TATATGCCTC TGATGCAATA AAAGCTGGTC GTTTAAAAGA AGAAATAGTT
CCTGTGGAGC TAAAGAGCAA GAAGGGTACA ACCATTGTTG ATACGGATGA AGGTCCTCGG
GCGGACACTA CTATGGAGGG GTTAGCCAAA TTACCACCAG TCTTTGACAA GAACGGGACT
GTCACAGCAG GTAATGCACC CGGTGTTAAT GACGGTGCAG GTGCATTGGT TCTTATGTCC
CGCGACAAAG CAATGGAACT AGGAATCAAA CCCTTAGCCA CCATTGTTGG ACATGCTGAG
GTTTCCCAGG AAGCTCGTTA TATTGCAACT GTTCCCGGTC TGTCTACAAT GAAACTTTTA
CAACAAAAGG GTATGTCCAT AGATGATATT GCACTGATAG AGGCTAATGA AGCCTTTGCA
GCCGTAGCTC TGACAAGCGG CAAGATTACT AACTGGGACA CCAAACGAGT CAATGTAGAT
GGTGGAGCAA TTGCCTTTGG TCACCCCATC GGAGCCAGCG GAGCCAGAAT CCTTATGCAC
CTGGCCTTTG CTCTGCGGGC ACGTGGTGGT GGATATGGGA TTGCTTGCAT CTGTAGTGGA
GCAGCCCAGG GTGATGCCAT GATGATTAAA GTTGAGTAG
|
|---|
| Protein sequence | MKETVIVSAA RTPFGRFGGG LKSLKAVDLG GIAIAEAIRR AGVSSEQIDY VYMGQVLQGG
CGQVPSRQAT RKAGLPWEVP SITVNKVCSS GLITVSLADK AIRLGEIDIA VAGGMESMSN
APYFLPGMRW GSRMMNSSAV DLMVNDGLWC SFYDRHMAIH GSEVASEFGL SREAQDEWAL
RSQLYASDAI KAGRLKEEIV PVELKSKKGT TIVDTDEGPR ADTTMEGLAK LPPVFDKNGT
VTAGNAPGVN DGAGALVLMS RDKAMELGIK PLATIVGHAE VSQEARYIAT VPGLSTMKLL
QQKGMSIDDI ALIEANEAFA AVALTSGKIT NWDTKRVNVD GGAIAFGHPI GASGARILMH
LAFALRARGG GYGIACICSG AAQGDAMMIK VE
|
|---|
| |