| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0383 |
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| Symbol | |
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| ID | 4955659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 411459 |
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| End bp | 413699 |
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| Gene Length | 2241 bp |
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| Protein Length | 746 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640179552 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_001111756 |
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| Protein GI | 134298260 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2206] HD-GYP domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATATT ACCAAAAAAC TCCCCCAAGA AAAATACCAA TTCAGACTAA AGACTCCTTG
CTCAAAATCA TTTCTGAACT AGAGCAGAGA TTGCAACAAA TTACCAATAA CATGTTAGAT
CTGTATACCG AAACAGACCT AGCGGGTATT ATTCGATACG TCGGTCCCTC TCACAAAACC
ATTTTAGGCT ATGACCCAAA AGCACTCAAA GGAACATCAG TTTTCTCTCG CATTCATCCC
AAGGATATAA GTAAGGTAAC CGATGCTTTT CAGACTGCGC TTAACTCAGC TTCTGAAATA
ATTGTAGAAT ATCAACTACA ACATGCAACT GGTCATTATT TATGGGTTGA GTCCGTTGGT
CGGTGCTTAG TGGAAGGAGA TAGAAGAACA GGCGTTGTTA TCAGCACCCG AAACATTACA
AAACGAAAAG AGTTTGAAAA TGCCCTGAGA GAAAGCGAAT TTCGATTTCG GCAGATTACC
GAAAACATGC GCGACATCAT TATACAAATT GATAAATGTG GAACTCTTAC CTATGTCGGC
CCATCTGTAA AGTTTCTCTT GGGTTATCAA CCTGAGAGGC TTTTAGGGAA AAAGGTGTTT
GAATTATTGC ACTCGGAGGA TTACGATAAA ACCACTAAAC TATTTGCAAA TAGTTTAGCA
AACTATACGG AAGGCGAATT TGAATGTCGC TGTCGTCATG CAGACGGGCG CTATCTCTGG
CTGGAATGTG CAGGAAAAAT ACTATCAAAT AGTCATGGTC AGGCCACAGG AGCTATTATC
ACTGCCAGGG ATATAACGGA TCGGAAAATG ACGAAGCAGG CCCTCCTAGC AAGCGAAGAG
CGAATCAGCC GTATAACTGA GAATATGCTT GACATTATGG TTGAGCTAAA TTCGGAAGGA
ATTACACAGT ATGTCAGTCC CTCAGTTAAA ACTGTTTTAG GATTTGATCC TAAAGACCTC
CTAGGAGTAC CGGTATTTAA GAACGTTCAT CCAGAAGACC TTGATCGGGT TCTTGAAGCC
TATGAAAAAA GCATCAATCA CTGGTCTTGT ATGAGGGTTG ATTTTCGTTA TAAAAATGCA
CAGGGCTATT ACCGCTGGTT GGAATTAATC GGCAATATCC TGCAGGATGA GCATGGATCA
GTGAGCACCA GTATCTTATG CCTACGTGAT ATCACCGAGC GCAAGTGGGC CGAACTACAA
ACAAAGTATT TCAGTATGCA TGATCCCGTC ACAGGACTCT ATAACCGTAC ACACTTTGAG
TTGGAGATGC GCCGACTGGA AAACAGTTCT GAGCCTGTGG GCTTGATTGT TGCAGACTTG
GACGGTCTAA AACTGATCAA TGATACCATG GGCCACGAGG TCGGAGACAA TGCCCTAAGG
GCCGTAGCCA ATATATTAAA AATATCTTAC CGCGAAGAAG ATATTGTTGC TCGAATCGGT
GGAGACGAGT TAGCGGTTAT ACTGACAAAT GTGTCTATGG ATACCCTAAA GGTTGCTGTG
TCTCGTTTAG AAAAAAACAT CAAGGATTAC AACATGGAAA ACCCAGGAAG TCATTTAAGT
TTGTCCATCG GTTATGCTCT GCGGGAACCT CCCACTAAAC CTTTGAATGA GGTCTTTAAA
GAAGCCGATT ACTATATGTA CCGTGCAAAG TTACACCATG CAAAAAGTAC ACGCAGTTCC
CTTGTACAAA CTCTTATGAA AGCTCTGGAA GCCCGGGATT TTATCACAGA GGGTCACGGG
GACCGCATGA AAAGTCTGGT TGTAAACATA GGTAAAGCCC TCGGGTTACC CGAAAACAAA
ATCTACGACC TGCAGCTTTT TGCACATTTT CATGACATTG GTAAAGTGGG TATTTCTGAT
AAGATTCTTT TTAAACCCAC AAAACTTACA CCGGACGAAC ATAATGAAAT TAAACGTCAC
TGCGAGATTG GCTACCGCAT TGCTCAAGCA TCTCCGGAAC TATTGCCCAT AGCCGATTGG
ATTCTCAAGC ACCATGAATG GTGGAACGGA CAAGGTTATC CCCTGGGATT AAAGGGAGAA
CAAATCCCTT TAGAATGCCG CATACTGGCC ATTGCAGACG CCTACGATGC CATGACCAGT
GACCGTCCTT ATCGAAAGGC CATCAGTCAC CAAGAAGCAA TTCGTGAGTT GGAACGCAAT
GCAGGAATAC AGTTTGATTT ATTTTTACTG CCAATGGCCG TCAAGGTTAT TGAACAATCT
CTGGCCTTCT CGGTAGATTA A
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| Protein sequence | MEYYQKTPPR KIPIQTKDSL LKIISELEQR LQQITNNMLD LYTETDLAGI IRYVGPSHKT
ILGYDPKALK GTSVFSRIHP KDISKVTDAF QTALNSASEI IVEYQLQHAT GHYLWVESVG
RCLVEGDRRT GVVISTRNIT KRKEFENALR ESEFRFRQIT ENMRDIIIQI DKCGTLTYVG
PSVKFLLGYQ PERLLGKKVF ELLHSEDYDK TTKLFANSLA NYTEGEFECR CRHADGRYLW
LECAGKILSN SHGQATGAII TARDITDRKM TKQALLASEE RISRITENML DIMVELNSEG
ITQYVSPSVK TVLGFDPKDL LGVPVFKNVH PEDLDRVLEA YEKSINHWSC MRVDFRYKNA
QGYYRWLELI GNILQDEHGS VSTSILCLRD ITERKWAELQ TKYFSMHDPV TGLYNRTHFE
LEMRRLENSS EPVGLIVADL DGLKLINDTM GHEVGDNALR AVANILKISY REEDIVARIG
GDELAVILTN VSMDTLKVAV SRLEKNIKDY NMENPGSHLS LSIGYALREP PTKPLNEVFK
EADYYMYRAK LHHAKSTRSS LVQTLMKALE ARDFITEGHG DRMKSLVVNI GKALGLPENK
IYDLQLFAHF HDIGKVGISD KILFKPTKLT PDEHNEIKRH CEIGYRIAQA SPELLPIADW
ILKHHEWWNG QGYPLGLKGE QIPLECRILA IADAYDAMTS DRPYRKAISH QEAIRELERN
AGIQFDLFLL PMAVKVIEQS LAFSVD
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