Gene Dred_0381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0381 
Symbol 
ID4956153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp407452 
End bp409188 
Gene Length1737 bp 
Protein Length578 aa 
Translation table11 
GC content46% 
IMG OID640179550 
Productpyruvate kinase 
Protein accessionYP_001111754 
Protein GI134298258 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0469] Pyruvate kinase 
TIGRFAM ID[TIGR01064] pyruvate kinase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAAAA CAAAAATAGT TTGTACCATA GGACCAGCCA GCGAAAGATT AGAAACCATT 
AATGAAATGA TCAAAGCTGG TATGAATGTT GCCAGACTGA ACTTTTCGCA CGGTTCCCAT
GAGGAACATG CTAAGCGTAT CACAACCATT CGTTGTGCAG CACAAGAGAT GGGACAAAAT
ATTGCTATTT TATTAGATAC CAAAGGTCCT GAAATCAGGC TGGGGGATTT TCAGGAACAA
CCAGTGCTAC TAGAGGCAGG ACAGTCATTT TTTTTAACAA CCGAACCGAT TATAGGGGAT
CAGCACGGAG TTTCCGTTAC ATATGAGGAC CTGTCAAAGG ATGTCAAAAG GGGAGACCGT
ATCCTGGTTG ACGATGGTCT AATTGAATTA GTAGTTGAAG CTGTTGAAGA AAAAAAGATA
GTTTGCCGGG TAATGAATGG CGGAAAAGTT TCTAACCGCA AAGGAGTAAA TTTACCGGAT
ATTCATGTAA ACTTACCGGC GGTAACGGAG AAGGATATTG CAGATATCAA ATTTGGCATA
GAACAGCAAG TGGATTTTAT TGCGGCATCC TTTGTACGCA AGGCTGGGGA TGTCTTAGCC
ATTCGGAAAA TTTTGGAGGA TGACGGGGCT AAAATTGATA TTATTGCCAA GATAGAAAGC
CGAGAAGCAG TTGATAATCT GGATGAGATT ATCCAAGCAT CAGATGGTAT CATGGTGGCC
CGGGGTGACC TAGGGGTAGA AATTCCGGCT GAAGAAGTAC CCATTATTCA AAAAAAAATA
ATAACCATTT GTAACCAAGT AGGAAAGCCC GTGATTACCG CTACCCAAAT GCTTGATTCC
ATGATTCAAA ACCCTCGCCC GACCAGGGCA GAGGCCAGTG ATGTGGCGAA TGCCATCTTT
GATGGAACTG ACGCCATCAT GCTATCCGGG GAATCTGCCA ATGGCAAATA TCCCGTTGAA
GCTGTAAGGA CAATGGATCG CATTGCCAGA CGTTCGGAAC AAGCCCTGAG CGACGGGGCT
AAAACATACA CTAACTGCTT TAGTGTTACC GATGCCCTAG GTCAGGCCGT ATGTACTGTG
GCCAACCAAC TGGACGCAGC TGCCATTATT ACTGCCACCA CCAGTGGCTA TACGGCAAAG
ATGATTTCAC GCTATCGCCC CCAATCAGCC ATTGTGGCGG TGACGCCGGA CCGAGGTGTC
ATGAGACGGC TGTCATTGGT TTGGGGAGTG GTTGCATTAC CTTCACCAAA GCTTACCAAC
ACAGACCAAA TGATTGCTAC AGCGGTGGAT ACCGCAGTGG AACAAAAAGT CGTAAAGGGT
GGAGATCTAG TAGTCATCAC TGCAGGGGTA CCTGTAGGAC TTCAGGGAAC CACCAACTTG
ATGAAGATTC ATACTGTAGG AACCATAGTG TCCAGTGGTA CAGGGATTGT TGCACAGGCT
GTGTCTGGGC CGGTAAGGGT ATGCAATGAT GCTGAAGAGG CGGCTAGGCT GGAACCAGGT
GAAATCCTCG TAACCAACGG AACTGATGCA GGCTTTGTAC CATTCCTGAA GAATGCTGCT
GCCATTGTGG CGGAAGAGGG AGGGCTAACC TCTCACGCAG CAATTTTAGG ACTGGAGCTA
AAGGTTCCAA CCATTGTGGG AGCGAAAGGT GCCAGCGGAA TATTTAAAAA TGGTGAAATC
ATTACAGTGG ATGGTCAAAG TGGTGTTATT TACAGAGGAA ACGCCAAGGT TTTCTAA
 
Protein sequence
MRKTKIVCTI GPASERLETI NEMIKAGMNV ARLNFSHGSH EEHAKRITTI RCAAQEMGQN 
IAILLDTKGP EIRLGDFQEQ PVLLEAGQSF FLTTEPIIGD QHGVSVTYED LSKDVKRGDR
ILVDDGLIEL VVEAVEEKKI VCRVMNGGKV SNRKGVNLPD IHVNLPAVTE KDIADIKFGI
EQQVDFIAAS FVRKAGDVLA IRKILEDDGA KIDIIAKIES REAVDNLDEI IQASDGIMVA
RGDLGVEIPA EEVPIIQKKI ITICNQVGKP VITATQMLDS MIQNPRPTRA EASDVANAIF
DGTDAIMLSG ESANGKYPVE AVRTMDRIAR RSEQALSDGA KTYTNCFSVT DALGQAVCTV
ANQLDAAAII TATTSGYTAK MISRYRPQSA IVAVTPDRGV MRRLSLVWGV VALPSPKLTN
TDQMIATAVD TAVEQKVVKG GDLVVITAGV PVGLQGTTNL MKIHTVGTIV SSGTGIVAQA
VSGPVRVCND AEEAARLEPG EILVTNGTDA GFVPFLKNAA AIVAEEGGLT SHAAILGLEL
KVPTIVGAKG ASGIFKNGEI ITVDGQSGVI YRGNAKVF