| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0370 |
|---|
| Symbol | |
|---|
| ID | 4956552 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 392779 |
|---|
| End bp | 393693 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640179538 |
|---|
| Product | phage integrase family protein |
|---|
| Protein accession | YP_001111743 |
|---|
| Protein GI | 134298247 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTAACC AAGAATTAGT AAAAACATTT CTAATGTATC AAGAAACAAA GAATCTCTCA
AAACGAACCA TCGAGTGGTA TCAGTTTACT TTGAACAAAC TTATTGACTA CTGCAAGGAG
AACAATATTT CTATTGAATC TATGACCACA CCACAAGCCA GGCAATATGT ATTTTCACTT
CAAAAATCAA TAAGTAGAAC AGGTAAGAAG TATGCTGACA ATGGCATTAA TGGCTATATT
CGCTCAGTTA AAATCATGTT CAATTACTTG TTTGAAGATG AATACATTGA GAAAAATCCC
TTTGCCAAAG TGAAGCAGAT TAAAACTGAT AAGGTTATTA TCGAAACTTT TGAAGTAGAA
GAAGTTAAAC GTATGCTCAA CCAATTCAAT AAGAAAGTTT ACACTGAATT TAGGGACGCC
TTATTAATTC AAATTTTATA TGATACAGGA ATTCGTATTT CAGAAGCAAT TAATCTTAAA
ATATCTGACA TAGACACAGA TAAAAATATG TTTAAGGTAT TCGGTAAAGG CCACAAAGAG
CGTATGGTTC CCTTTGGACG TTCTATCAAA CGTGAAATAC TAAAATACCT TCCCAAACGA
AACAAAGAAG TTGATAAGGA ATTAGACGAA GGTTATTTAT TCTCAACTAG AAATGGCACT
GCTTTAACCA TTAGGAACGT CCACAGAAAA ATAGTTGAAG TTGGCACTAA AGCAAAAATA
AAAGGTAAGC GTCTGTCTGC TCACACTTTT AGACACACCT TTGCAAAAAC CTACTTGGTA
AATGGTGGTA ATTTATTTTC CCTCCAAACC ATTATGGGAC ATAATGACTT ATCAACCACT
AGAAAATATG TCCACCTTCT CACCGAAGAT ATTCAAAAGC AACACCGTCA ATTCAGCCCC
TTAGACAATC TTTAG
|
|---|
| Protein sequence | MTNQELVKTF LMYQETKNLS KRTIEWYQFT LNKLIDYCKE NNISIESMTT PQARQYVFSL
QKSISRTGKK YADNGINGYI RSVKIMFNYL FEDEYIEKNP FAKVKQIKTD KVIIETFEVE
EVKRMLNQFN KKVYTEFRDA LLIQILYDTG IRISEAINLK ISDIDTDKNM FKVFGKGHKE
RMVPFGRSIK REILKYLPKR NKEVDKELDE GYLFSTRNGT ALTIRNVHRK IVEVGTKAKI
KGKRLSAHTF RHTFAKTYLV NGGNLFSLQT IMGHNDLSTT RKYVHLLTED IQKQHRQFSP
LDNL
|
|---|
| |