Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_0349 |
Symbol | |
ID | 4957244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 367760 |
End bp | 369043 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640179515 |
Product | transposase IS116/IS110/IS902 family protein |
Protein accession | YP_001111722 |
Protein GI | 134298226 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3547] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.248005 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATTATA AACAAAAACA AAGAATTGAG CAACTCACTG AATCAACTTT AATTATTGGA GCCGATATTG CCAAATCTAA ACACGTGGCA CGTGCCCAGG ATTTTAGGGG TATCGAGTTG GGGAAACGCT TGGTCTTTGA CAACACTAGG GCGGGCTTAA CCAAGCTGAT GCATTGGATT AGAACCTTGA TGGTAGAGCA CGGTAAGGAT CATGCTCTGG TAGGTATCGA ACCCACAGGA CACTACTGGT TACCAATGGC TGAGTTTTTG CGCAAAGAAG GTGTACCAGT TGTAGTTGTA AATCCGTTGC ATGTTAAGAG AAGCAAGGAA TTAGATGATA ACTCGCCCAC AAAGAACGAC ATCAAAGATG CAAGGGTAAT TGCCCAATTA GTAAAAGATG GCCGTTACTC AGAACCCAAC TTACCCACAG GTGTCTATGC GGAACTGCGG GTGGGAATGG TTCAAAGGGA CCGTCTTAAT CAAGACCTTA ACCGAGTAAA AGGTAGAATC CACAACTGGC TTGACCGGTA CTTCCCCGAG TACACAAGTG TTTTCAAAGA TTGGGAAGGC AAAGCATCCT TGATGATATT AAATACTTGT CCACTCCCCC GGGAAGTCAT CAAAACAGGC ACAGAGGCAA TTGTAACCCT GTGGAAAACT GAGATTAAAC GGGCAGTTGG TATAAAAAGA GCTAACAAAC TAATGCAGGT TGCTAGAGAA TCCATCGGAC TATCCACAGG GATAGAGTTT GCCCGTCATG AAATAAGGAT GCTACTTGAA CAATATGACA TCCTGTGCAA ACAGATGGAA ATCCTGATGG AAGCAGTTCA AGAGTTACTG CAACAAATAC CTGGAAGCAC AGAAATGATG ACCATTCCAG GAGTCGGTTT GGTTACAGTA GCCGGATTTC TTGCAGAAGT AGGCGACTTA AAAGGATATG AACATGGGCA ACAAATCATA AAGTTGGCGG GCCTAAACCT AAAAGAGAAC AGTTCTGGTA AACACAAGGG ACAATCACGA ATCAGTAAAC GGGGGCGCCC CCGGCTGCGG GCCTTGTTAT TTAAGACTGT GTTAGTCATG GTTGCAAAAA ACCGAGAGTT TAAGGCCATC CACCAATATT TAATAACAAG GCATGGAAAT CCCTTAAAGA AAAAGCAATC CATAGTTGCC CTCTGTGGAA AATTGATTCG TATTTTGTTC ACCATAGGCA GTAAACAAAC TCCATATGAC GCGGAGCAAG TATTAGGCGT TGTACGCCAA GAGCAATTAC AGGAAGCTGC TTAA
|
Protein sequence | MNYKQKQRIE QLTESTLIIG ADIAKSKHVA RAQDFRGIEL GKRLVFDNTR AGLTKLMHWI RTLMVEHGKD HALVGIEPTG HYWLPMAEFL RKEGVPVVVV NPLHVKRSKE LDDNSPTKND IKDARVIAQL VKDGRYSEPN LPTGVYAELR VGMVQRDRLN QDLNRVKGRI HNWLDRYFPE YTSVFKDWEG KASLMILNTC PLPREVIKTG TEAIVTLWKT EIKRAVGIKR ANKLMQVARE SIGLSTGIEF ARHEIRMLLE QYDILCKQME ILMEAVQELL QQIPGSTEMM TIPGVGLVTV AGFLAEVGDL KGYEHGQQII KLAGLNLKEN SSGKHKGQSR ISKRGRPRLR ALLFKTVLVM VAKNREFKAI HQYLITRHGN PLKKKQSIVA LCGKLIRILF TIGSKQTPYD AEQVLGVVRQ EQLQEAA
|
| |