| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0346 |
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| Symbol | |
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| ID | 4957324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 362048 |
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| End bp | 363454 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640179512 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001111719 |
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| Protein GI | 134298223 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.143008 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAATGATC GAAAAAGAAT TGAGCGGGAA TTTAGAGAAA ATCCAGTACT AGCCGGCGTT
CTTATAGATA ATCCTTATGA AGGGTTTATT GTTGTTAATA AAGATGGTTT TGTAACATTT
ATTAGCAATC TTTACCTTGA TACTATAAAT TTAACAAGAG AGGATACTAT AGGTAAACAT
ATTACAGAGG TTCATGAAAA TACAAAACTA ACCCAAGTTC TAGAGACAGG AAAACCAATT
TCATATGATT ATTGGGAAAC TAAAGGAATG ACACTTATTG TTGTACGTTT TCCAATACTT
AACAATGCAG GCGATTTAAT TGGAGCAGTT GGAAAGGCAG TTTTTGTTGA TATACCCTCA
GGAAAAACGT TGGCCAATAA ACTAAAACAA TTGGAAAAAG AAGTAGAATT TTACAGGCAA
GAGTTATACA AATTTTACAA TGCAAAATAC ACTTTTAATG ATATGATCGG AGAAAGCGAT
GCAATTAAAA AAGTAAAAAA AATAGCTCAA AAAATTGCAT TATCTGAATC AACGGTATTA
ATTACAGGGG AAAGTGGGAC AGGTAAGGAG TTGTTTGCCC AAGCTATTCA TAATGCCAGT
TACAGGTCTC GGTTTCCCTT TGTACGAATA AATTGTGCGG CTGTACCGGA GAACCTTCTT
GAGGCAGAGT TATTTGGATA TGCTGAAGGG GCCTTTACTG GAGCTAAAAA GGGTGGAAAG
CCGGGCAAAT TTGAATTGGC CCAGGGGGGT ACAATTTTCC TCGATGAAAT TGGTGAATTA
CCCTTAAGTA TGCAATCCAA ACTTCTAAAT GTTTTGCAGG AACGGGAAAT AGAAAGGGTA
GGAGGAATCC GAACGGTTAG TGTTGATTTT AGAGTTATTG CAGCAACCAA CCGTAATCTT
GAAGACATGG TAAAAGAGGG TACTTTTCGT GATGATCTTT ATTATAGATT AAATGTAATT
TCTTTAAAAA TACCTTCGCT GCGTGAACGG CAGGATGATA TACCTCTTTT GGTGAATTAT
TTTACCGATA AACTTAATAA TAAACTAAAG TGTAGTGTAG AGAGATTTAC TGAAGAAGCA
ATGTTAGTTC TTTCAAAACA CTACTGGCCT GGGAACATTA GAGAACTACA AAATACTTTG
GAGAGAGTTT TTATATTGTC AGATGATAAT ATAATATCTG TGAACCATTT ACCTTTTTCT
ATAAAAATGA GAAAAGGCAA TATTATACAA TCTAAAAGAC TTACTTTAGA TGAGATGATA
GATCAAACTG AAAAAAGAAT AATTTTAGAT ACATTAAGTA ATGTAAAAGA TGACCGTATT
GCTGCTGCTG AACTTTTAGG GATACACCTT TCCTCACTCT ATAGAAAAAT GAAGAAGCAT
GGTATTAAAA AAAGTTTCAC CTCTTAG
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| Protein sequence | MNDRKRIERE FRENPVLAGV LIDNPYEGFI VVNKDGFVTF ISNLYLDTIN LTREDTIGKH
ITEVHENTKL TQVLETGKPI SYDYWETKGM TLIVVRFPIL NNAGDLIGAV GKAVFVDIPS
GKTLANKLKQ LEKEVEFYRQ ELYKFYNAKY TFNDMIGESD AIKKVKKIAQ KIALSESTVL
ITGESGTGKE LFAQAIHNAS YRSRFPFVRI NCAAVPENLL EAELFGYAEG AFTGAKKGGK
PGKFELAQGG TIFLDEIGEL PLSMQSKLLN VLQEREIERV GGIRTVSVDF RVIAATNRNL
EDMVKEGTFR DDLYYRLNVI SLKIPSLRER QDDIPLLVNY FTDKLNNKLK CSVERFTEEA
MLVLSKHYWP GNIRELQNTL ERVFILSDDN IISVNHLPFS IKMRKGNIIQ SKRLTLDEMI
DQTEKRIILD TLSNVKDDRI AAAELLGIHL SSLYRKMKKH GIKKSFTS
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