| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0340 |
|---|
| Symbol | |
|---|
| ID | 4957601 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 353523 |
|---|
| End bp | 354668 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640179505 |
|---|
| Product | putative ATP/GTP-binding protein |
|---|
| Protein accession | YP_001111713 |
|---|
| Protein GI | 134298217 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2301] Citrate lyase beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCTTTA TTCCTCCGGT CGAATTACGA GAGGATCATG ATAAGGACAC TTTGGCCCAT
GCCTTAGGGG CTACCCTGTA TATGCCGGGT ACTGCCAACA GGGCCATTGA TAAAGTGATT
AACAATGAAA TCCCCGGTCT TACCTCTACG GTTCTTTGTC TTGAGGATGC GGTAGACGAT
CGGGAAGTTG AAGATGCTGA GGAAAACCTT GCTTTGCAGC TGGGGACTCT GCTTGCAATG
GCAGAAAAGG GGAGTTCGCT CCCCTTTATC TTTGTTAGGG TTCGCAATGT GGAGCAATTT
AAAAGGCTGA CCCAAGTCCT TGGGGAAAGC ATCCATGTGT TAACCGGTTT TGTATTTCCA
AAATTTGACA TGATGGCCGG TCAGGAATAT TTTGCACATC TTACTACAAT TAATAAAACT
ACGAAGAAAA CTATATATGG CATGCCCATA TTAGAGGGGC CATCCGTGAT TCATCTGGAA
TCAAGGGTAA GAGAGATGCT AAAAATTAAG GAACTGCTTG ATCAATACAA GGAGTTAGTA
TTAAATGTAC GCATGGGAGC AACGGATCTT TCTGGTTTGT ATGGTCTTCG CAGGAGCCCG
GAACTTACCA TCTACGATGT CTCTGTAATT CGAGACTTTA TTGCAGATAT GGTCAACATA
TTTGGTAGAC CTCAGGATGG TTACGTGATC TCGGGTCCGG TATGGGAATA TTTCAATAAC
ACGGCAAGGA TGTTAAAGCC CCAGTTAAGA AAAACCCCTT TTCAAGAACA GTATGGCAGA
GCAGGAGAAA GCTTCCGCTT AGAGCTTCTT GGCAGATACA TTGATGGATT AATGCGTGAA
GTTATGCTTG ATAAAGCAAA CGGCTTAGTG GGGAAAACCA TCATTCACCC ATCCCACATT
TTGCCCGTTC AGGCTATGTA TGTGGTAACA CACGAAGAAT ATTGTGATGC CAAAGATATC
TTGGCCAATG GTGGAAACGG TGGGGTAACC AAGAGTGTGT ACGGTAATAA GATGAATGAA
GCCAAACCTC ATATTAACTG GGCAAAGAAA ATCATGATTT TAGCAAAGAT ATACGGGGTG
TTAAATGAGA GGTATGACTA TACAAGCATT ATCTACGAAG GAGAAAAACT ACAAAATATT
GGATAA
|
|---|
| Protein sequence | MFFIPPVELR EDHDKDTLAH ALGATLYMPG TANRAIDKVI NNEIPGLTST VLCLEDAVDD
REVEDAEENL ALQLGTLLAM AEKGSSLPFI FVRVRNVEQF KRLTQVLGES IHVLTGFVFP
KFDMMAGQEY FAHLTTINKT TKKTIYGMPI LEGPSVIHLE SRVREMLKIK ELLDQYKELV
LNVRMGATDL SGLYGLRRSP ELTIYDVSVI RDFIADMVNI FGRPQDGYVI SGPVWEYFNN
TARMLKPQLR KTPFQEQYGR AGESFRLELL GRYIDGLMRE VMLDKANGLV GKTIIHPSHI
LPVQAMYVVT HEEYCDAKDI LANGGNGGVT KSVYGNKMNE AKPHINWAKK IMILAKIYGV
LNERYDYTSI IYEGEKLQNI G
|
|---|
| |