Gene Dred_0332 details

Gene Information

• Locus tag: Dred_0332
• ID: 4957779
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfotomaculum reducens MI-1
• Kingdom: Bacteria
• Replicon accession: NC_009253
• Strand: -
• Start bp: 345821
• End bp: 347689
• Gene Length: 1869 bp
• Protein Length: 622 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 640179497
• Product: PTS system, glucose subfamily, IIA subunit
• Protein accession: YP_001111705
• Protein GI: 134298209
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific; [COG1264] Phosphotransferase system IIB components; [COG2190] Phosphotransferase system IIA components
• TIGRFAM ID: [TIGR00826] PTS system, glucose-like IIB component; [TIGR00830] PTS system, glucose subfamily, IIA component

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAG CATTTAAGTA TTTACAGATG GTTGGACAAT CTTTAATGCT GCCTGTATCT 
GTGTTACCTG CTGCCGGTTT ACTGCTCAGG TTTGGTGAGA AAGATTTACT CAACATGCCT 
GCCATGAAGG AAGCTGGGTT GGCTATCTTT GCCAACCTAC CCTTGATATT TGCCGTGGGG 
GTTGCCATTG GTTTTTCTGG TGGACAGTCG GTAGCCGCTC TGGCCGCTGT AGTAGGGCAG 
TTAATCCTGT TAGCAGTACT GAAAGCAGTG GACCCCAGTA TTAACATGGG GGTATTTTCC 
GGCATTATCA TGGGTATTAC CGCTGCCCTA TTGTATAAAA GGTTTTATCA AATTAAGCTG 
CCCCAATACC TGGGCTTTTT CGCCGGGAAG CGCTTTGTTC CCATTATTAC CGCTGTGGCC 
GGTGTAGTGA TTGCTTTAAT TTCTGCCGTG GTTTGGCCCA GCATACAGAA TGTCATTGAT 
GCCGTAGGTC AGGTTGCGGT TAGTTCCAGT TTTGGTCCTG CCTTGTTTGC CGCCGGCAAA 
CGTTTACTGA TACCAGTTGG CCTGCACCAC GTTTACTATC CCTCTTTCTT GTATGAATTC 
GGTCAGTATG TAACTGCTGC CGGGGAAATT GTAAAAGGAG ATTTTAACCG TTACTTCGCT 
GGGGATCCAA CAGCCGGAAC CTTTATGGCC AGCGAGTTTC CCATAATGAT GTTTGGTCTG 
CCCGCTGCCG CCTTTGCCAT TTACCGTAAC GCCAGGCCCG AGCGCAAAAA AGCTATCGCA 
GGATTAATGG CCAGCGCAGC CTTTACCTCG TTCCTGACGG GTATTACCGA ACCAATAGAA 
TTTTCCTTTA TTTTTGTGGC ACCTGTGTTA TTTGTCTTCC ATGTACTAAT GGCCGGTGTG 
TCTGGTTTTG TAACAAATTT GCTTGATATT CATTTAGGAT TTACTTTCTC TGCCTCTTTC 
ATCGATTATC TATTGTCCTA TAAATATGGT CATAACCAGC TGTTGCTGTG GCCAGTGGGC 
CTGGTTGTCG GAGGTCTGTA TTTTGTAGTC TTTAATACCG CTATAAAAAT GTTGAACTTA 
AAAACACCGG GCCGAGAAGA TGAAATTACT GCAGTAGAAA ACCAAGGTAC CGGTTCTGAT 
TTAGCGCACA AGGTATTAGA TGCCCTGGGA GGAGCTAATA ATATTGAGAT ATTGGATGCT 
TGCATTACCC GTTTGCGGGT AACTGTAAAA GATCCAGACA TGGTTAAAAA AGATGTGTTT 
AAGGCTCTAG GTGCTTCTGG AGTTATGGAA ATGGGTAAAA ACCTGCAAAT TATTTTTGGC 
ACCCAATCCG ACAGCTTAAA AGAAGAAATC CGCAGTCTAA TGACTAATAC TGTTTCAGCC 
ACAGCAGAAG GGGCTAAACC CTTACCTGAG CTTAACGTTT CTGCCAGCAA AACTATGATT 
AAGGCTCCTG CCAGCGGTAA GGTTATTCCC TTAGAACAGG TACCTGATGA GACCTTTAAA 
CAAAAACTGC TGGGCAACGG AGTAGCCATT GAGCCAGTAG AGGGTACCTT TATAGCACCT 
GTGGCAGGAA CTGTTGTTCA AGTATTTCCT ACCAACCATG CTTTAACCAT AAAAACAGAA 
AACGGCATAG AAATCCTGTT GCATGTAGGC ATTAATACCG TTTCCTTAAA GGGCCAAGGC 
TTTAAAGCTC TGGTTTCCGA AGGGCAAAAG GTTACGGTAG GACAAAAACT TCTTGAGGTA 
GATTTAAAGC AGATTGAAAA GGCTGGCTTA TCTACCATTA CTCCTGTAAT TATCATTGGA 
TCTGAGGATA TGGAAATAAC CCCTGCAAAT GAAGTAACTT CTGGAGAAGA TACCATTTTA 
CAAATTTAA 

 

Protein sequence

MKKAFKYLQM VGQSLMLPVS VLPAAGLLLR FGEKDLLNMP AMKEAGLAIF ANLPLIFAVG 
VAIGFSGGQS VAALAAVVGQ LILLAVLKAV DPSINMGVFS GIIMGITAAL LYKRFYQIKL 
PQYLGFFAGK RFVPIITAVA GVVIALISAV VWPSIQNVID AVGQVAVSSS FGPALFAAGK 
RLLIPVGLHH VYYPSFLYEF GQYVTAAGEI VKGDFNRYFA GDPTAGTFMA SEFPIMMFGL 
PAAAFAIYRN ARPERKKAIA GLMASAAFTS FLTGITEPIE FSFIFVAPVL FVFHVLMAGV 
SGFVTNLLDI HLGFTFSASF IDYLLSYKYG HNQLLLWPVG LVVGGLYFVV FNTAIKMLNL 
KTPGREDEIT AVENQGTGSD LAHKVLDALG GANNIEILDA CITRLRVTVK DPDMVKKDVF 
KALGASGVME MGKNLQIIFG TQSDSLKEEI RSLMTNTVSA TAEGAKPLPE LNVSASKTMI 
KAPASGKVIP LEQVPDETFK QKLLGNGVAI EPVEGTFIAP VAGTVVQVFP TNHALTIKTE 
NGIEILLHVG INTVSLKGQG FKALVSEGQK VTVGQKLLEV DLKQIEKAGL STITPVIIIG 
SEDMEITPAN EVTSGEDTIL QI