Gene Dred_0318 details

Gene Information

• Locus tag: Dred_0318
• ID: 4958171
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfotomaculum reducens MI-1
• Kingdom: Bacteria
• Replicon accession: NC_009253
• Strand: +
• Start bp: 331998
• End bp: 332687
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 640179483
• Product: ABC transporter related
• Protein accession: YP_001111691
• Protein GI: 134298195
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACATA ACGTAAATTG TGTTATAGAT GCTAATAATC TGATAAAGAT TTACCAAAAT 
GGCTCTGAAG AACTTAAGGT GTTGGATGAT GTTAGCATAC AGGTATATAG AGGAGATTTC 
ATGGTCATCC TAGGGCCTTC TGGCTCGGGC AAATCTACCT TAATGAATAT ACTGGGCTGC 
CTGGATCTAC CTACTTCTGG ACAATATACT TTGGATGGTT TAAATGTCCT AGAGGCTTCG 
GATAATGAGT TGGCCGAGAT TCGCAACAAA AAGATTGGCT TTATCTTTCA AAAGTTTAAT 
CTGTTACCCA GATTAACCGC CCTGCAAAAT GTGATGCTTC CTTTGCTTTA TCGAGGAGTA 
AAGGAAGAAG AAGCCCTGGA GGCAGCAAAG GAAAAATTAA CCATATTAGG TTTAGGGGCG 
AGGCTTTTCC ATCGCCCCAA TGAGTTATCC GGCGGGCAAC AGCAGAGGGT GGCCATTGCC 
AGAGCAATCG TTGGTAATCC GCAACTGCTA TTGGCGGATG AACCAACTGG AAACCTGGAT 
AGCAAATCCA GTGAAGATGC CATTAGAATT TTTAAAGAAC TAAACCAACA AGGAAATACT 
ATCGTGATTA TTACACACGA CGTAGAAGTT GCTCAACAGG TAAAGAAAAT AGTCTATATA 
CGGGATGGAA AACTATATGA AAATCATTAG 

 

Protein sequence

MKHNVNCVID ANNLIKIYQN GSEELKVLDD VSIQVYRGDF MVILGPSGSG KSTLMNILGC 
LDLPTSGQYT LDGLNVLEAS DNELAEIRNK KIGFIFQKFN LLPRLTALQN VMLPLLYRGV 
KEEEALEAAK EKLTILGLGA RLFHRPNELS GGQQQRVAIA RAIVGNPQLL LADEPTGNLD 
SKSSEDAIRI FKELNQQGNT IVIITHDVEV AQQVKKIVYI RDGKLYENH