Gene Dred_0305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0305 
Symbol 
ID4956697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp320773 
End bp321588 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content43% 
IMG OID640179471 
Productintegrase catalytic subunit 
Protein accessionYP_001111679 
Protein GI134298183 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.667287 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAGTG TCTCAGATCG CAAAAAAGCC ATTTCACTGA TCAAAGAAGC TGTTGCTAAC 
GGGGCTAGAG AACCAGAGGC TTGTAAGGTA CTTGGAATTA CTCAACGTAC CCTGCAACGT
TGGCGAAGTA GTTTAACACC TATTGAAGAC CAACGAAAGA ATGCTAAACG GCCGGAACCT
GCAAACAAGC TTAGCATAGA TGAAAGACAA GCCATTATAG AAACTGCCAA TCAACCTGAA
TTTAAGAGTT TACCACCTAG TCAAATTGTT CCCCGACTAG CCGACCAAGG CATTTACCTA
GCTTCAGAGT CAACATTTTA CCGGGTGCTG AAAGAAAACA ACATGCAACA TCATCGTGGA
AGAGCTAAAA AACCATGTGC TAAGCCAATC TCAACTCATT GTGCTACAAG TCCAAACCAA
GTTTGGATGT GGGATATTAC TTGGTTACCA GGTCCTGCTA AGGGCATTTT TTTCTACCTA
TATCTAATTT TAGACCTATT CAGCCGTAAG ATAGTTGCTT GGGATATCTG GACTGAAGAG
TCCTCTGAAA ATGCTAGCAT ATTAGTACGA CGGGCCATAA TGTCTGAGAA ACGTACTCTA
GCTAATGAGC CACTGGTTTT GCATTCAGAT AACGGTAGCC CAATGAAAGG GGCAACCCTA
CTGGAAACAC TCTATCAGTT GGGGATAACT CCATCTAAAA GTCGCCCAAG AGTTAGCAAT
GATAACCCTT ACGCGGAATC CATTTTCCGC ACTTGCAAAT ACCGCCCTAA TTACCCGGCT
AAAGGATTTG ACACATTGAC TGAAGCTAGG GAATGA
 
Protein sequence
MISVSDRKKA ISLIKEAVAN GAREPEACKV LGITQRTLQR WRSSLTPIED QRKNAKRPEP 
ANKLSIDERQ AIIETANQPE FKSLPPSQIV PRLADQGIYL ASESTFYRVL KENNMQHHRG
RAKKPCAKPI STHCATSPNQ VWMWDITWLP GPAKGIFFYL YLILDLFSRK IVAWDIWTEE
SSENASILVR RAIMSEKRTL ANEPLVLHSD NGSPMKGATL LETLYQLGIT PSKSRPRVSN
DNPYAESIFR TCKYRPNYPA KGFDTLTEAR E