Gene Dred_0298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0298 
Symbol 
ID4958240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp312994 
End bp314625 
Gene Length1632 bp 
Protein Length543 aa 
Translation table11 
GC content32% 
IMG OID640179464 
Producthypothetical protein 
Protein accessionYP_001111672 
Protein GI134298176 
COG category[L] Replication, recombination and repair 
COG ID[COG0323] DNA mismatch repair enzyme (predicted ATPase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTTGTT TGATAAAAAA ATTAAATGTT AATGAAGTTT CGTTGTATAG GGAAATAGCT 
AAAAATTTAG TAAACCCATT GGAGGTTATT AGAGAGGCTA TTAGTAACTC TCATGATGCT
CAAGCTAACG AAATAAGAAT TAAGATTTAC CGCAACTCTG ATAATGCTCT GTGTATCCAA
ATAAGTGACG ATGGCAAGGG AATGAGTGAA GAAGACTTTG AACGCTTTTT TAACTTAGGA
GATTCTCTTA AAAAAGATAA TAATATTGGA CAGAAGGGTC TAGGAACTAA AACATATTTC
AGAAGTAAAA AACTTTTAGT AGAGTCACAG GTTAGTGATA AGAGATATAG GGCTATCCTC
CAAGAACCTT GGGAAAAGCT TAGTTCCAAT GTATTGCCGG AATATGATTT TGAACAAATT
GCTATAAAAC CAGGAGAGAA TGGAACTTTT ATTACTATTG AAGACTATAA AATTGACAAA
CCAGAGAATT ATTTTAACTT TGATACTTTA ATGGATTATA TACTATGGTA TACTGCTGCC
GGCTCATTTA AGACTAAATT TTCTAATCAA CTTAGCCTCC GTAAATATGT AAAAAACATA
AACATATCTC CGATAATATT CTTAGACGAT GAAATAAACC ACAAAAAAGA AGAATTTATA
GGTGAACATC GCTTTTCTGA TCCTAATGAA AATCCTGAAG TAGTACTTGA TGAGGAAAAA
AACCCTAAGT CATGCAATTA TTGTAAACAC TTTGGCCCTT TTCACAGGGA AACTACTATA
GCAGGCAAAT TTGCTTCTTT TCAATTGTAT GGTACCGTTT CTGGAATCAA CAAGAGGAGA
GAAATTAGCC ATTTTTATGT TGGAGAAACT CATAAGTCAA GGTTTGGTTT ATATCTATGC
AAAGATTTTA TTCCAATTAT CAACCGTAAA GACTTAATTA ACGACTCAAA TTATCAACAT
TATCATCTGT TACTTAATTC ACAGAACTTT GATTTAACTG CTGATAGGAA TAACATCTCG
AATGAAGATG ACCCTATCGT TAAATGGGTT TTTGAAGAAG TCGATAAGAT TCTATCAAAA
GATGTAAAAC CAATAGCAGA AGCAGCATAT TTTAATATGA GAAGAGAAGA GGACGAGGTT
TATAAGCAGA AAAAACGAGC TGATGAATTA AAAAATCGTA TTGAACATTA TAATAGCCTA
GAGAACCTTC AAATCGATAA TCTTCCAGTG GTAAAGGTTC CTAATAATGA GGCACAGGTA
GCTATTCTTT TTACTTCTCT GCTATCAAAA TATGGGGATT TACATTTTGA TAACATAAGG
ATAGGGCATT ATTCAGATAA ATCTACTACG GACCTTATTT GTTTAGATAA AGACAATAAG
CCTATCTTGG TCGAACTTGA ATATAAATTG TCGAATCTTT TTTACCATGG ACACTCGTAT
AATACATTTG ATATTGTTGT GTGCTGGATG GTAGATTTAG AGCTTAACAG TAAACGCCAG
ACGCCTGATC ATATTACGCT TAAACTAGTG AAGACTGAGG ATAAGTGGTT CTTAAAATAT
GGTCCAGATA AAACAATTCC CATAATTGAG CTAAAGTCTA TAGTAAATGA AATTAACAAC
AAAAATAATT AG
 
Protein sequence
MFCLIKKLNV NEVSLYREIA KNLVNPLEVI REAISNSHDA QANEIRIKIY RNSDNALCIQ 
ISDDGKGMSE EDFERFFNLG DSLKKDNNIG QKGLGTKTYF RSKKLLVESQ VSDKRYRAIL
QEPWEKLSSN VLPEYDFEQI AIKPGENGTF ITIEDYKIDK PENYFNFDTL MDYILWYTAA
GSFKTKFSNQ LSLRKYVKNI NISPIIFLDD EINHKKEEFI GEHRFSDPNE NPEVVLDEEK
NPKSCNYCKH FGPFHRETTI AGKFASFQLY GTVSGINKRR EISHFYVGET HKSRFGLYLC
KDFIPIINRK DLINDSNYQH YHLLLNSQNF DLTADRNNIS NEDDPIVKWV FEEVDKILSK
DVKPIAEAAY FNMRREEDEV YKQKKRADEL KNRIEHYNSL ENLQIDNLPV VKVPNNEAQV
AILFTSLLSK YGDLHFDNIR IGHYSDKSTT DLICLDKDNK PILVELEYKL SNLFYHGHSY
NTFDIVVCWM VDLELNSKRQ TPDHITLKLV KTEDKWFLKY GPDKTIPIIE LKSIVNEINN
KNN