Gene Dred_0295 details

Gene Information

• Locus tag: Dred_0295
• ID: 4958503
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfotomaculum reducens MI-1
• Kingdom: Bacteria
• Replicon accession: NC_009253
• Strand: +
• Start bp: 307919
• End bp: 309748
• Gene Length: 1830 bp
• Protein Length: 609 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640179461
• Product: glucosamine--fructose-6-phosphate aminotransferase
• Protein accession: YP_001111669
• Protein GI: 134298173
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains
• TIGRFAM ID: [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing)

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.250697
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTGTGGTG TAGTCGGCTA TGTAGGAAAC AAACCTGCAA CACCTATTAT TGTGGATGGT 
TTAAAGAAAC TTGAATATAG AGGTTACGAT TCTTCCGGTG TGGCTGTTCT GGATAAGGAC 
GGCCTAAAGG TCGAGAAAAA AATGGGCCGT TTAGCTGAAT TGGAAAAGGC CCTGGCAGGC 
AGAGAAGTGG AAGCTACCAT TGGCATTGGC CATACTCGCT GGGCCACCCA CGGTCGCCCC 
AGCGATGTAA ATGCACACCC CCATACCTCC AATGACGGTA AAATTGCGGT GGTTCACAAT 
GGGATTATAG AAAACTACCT GCAATTACGG GAATGGCTAT CTTCCCAGGG CCATACCTTT 
AAATCCGAAA CCGATACCGA AGTAATCCCC CATCTGATCG AACATTTCTA TAAAGGGGAT 
CTCATTGAAG CTGTACAAAA AACTGTGTCC CATTTGGAAG GTTCCTATGC CATCATGGCT 
ATCTCTGTGG ATCAACCCGG ACGTATTGTG GCAGTGCGCC AGGATATGCC TCTGGTTGTT 
GGTCTGGGTG AAGGTGAAAA CCTGCTGGCT TCCGACATCC CGGCCCTGCT AAAGCACACC 
CGGAAGTGCT ATCTGCTCAA TGACGGTGAC GTGGTTGATT TACGGGCAGA AGAAGTAATT 
ATTCAGGATG TTACGGGTAA AGTTGTGCAA AAGGATATCT TCGAAGTGAC CTGGGATGCC 
GAAGAGGCCG AAAAGGGCGG CTATGAGCAT TTCATGCTGA AAGAAATTAA CGAGCAGCCC 
AGAGCCCTGC GGGATACTCT GAAGGGCCGT ATCTCCCATG CTGGAGATAA AGTAATCCTG 
GATGAAATCA AGATGACCCC GGAGGAAGTT CAAAATATCA AACGAGTTAT TATCACCGCC 
TGCGGTACGG CCTACCATGC AGGGCTGGTG GGCAAATACG TAATCGAACA ACTGGTACGG 
GTTCCAGTTG AAGTGGATAT TGCTTCGGAA TTCCGCTACC GTGATCCCCT AGTGGATAAA 
GACACCTTGG TTGTGGTAGT AAGTCAATCC GGGGAAACTG CCGATACCCT GGCAGCCCTC 
CGGGAAGCCC GCCGCCGGGG GGCCAGAGTG GTGGCCATTA CCAACGTCAT TGCCAGCTCC 
GTTGCCCGGG AAGCAGACGA TATTATCTAC ACTTGGGCCG GCCCTGAAAT TTCCGTGGCC 
TCCACCAAGG CCTATACCAC CCAGTTGGTA GCCATGTACC TCTTGGCCCT ATACCTGGCC 
CAGGAGCGTA ATACTCTGGC AGCCGGCAAT ATTAAAGAAA TTCTGGATGA CCTAAAAAGT 
ATTTACGCCA AGGCCCAAGA AGTACTGGAT GATATTGAAC CCATTAAGGA ATTTGCCGAA 
AAATACCACA AGGCAGAGGA TACCTTCTTC ATTGGCCGTG GCCTGGACTA CGCCGTAGCT 
TTGGAAGGGT CCCTAAAACT GAAGGAAATC TCCTACATCC ATGCCGAAGC CTACGCTGCC 
GGTGAACTGA AACACGGCAC CCTGGCCCTG ATTGTGGAGA ATATCCCAGT GATTGCTCTG 
GCCACCCAGC AAAGCCTCTT TGAAAAAATG GTTAGTAACA TCAAAGAAGT GAAGGCCAGA 
GATGCCTCTG TAATTGCCCT GGCCATGGAA GGACATACCG AAGTGGAAAA GGTAGCTGAC 
CAAGTACTGT ACATTCCCAA GACCCACCCG GTACTGGCAC CCATTATCAC CGTAATTCCA 
CTGCAACTGT TGGCCTACTA CATGGCTGTA TACCGCGGTT GTGACGTTGA TAAGCCAAGA 
AATTTGGCGA AGAGTGTAAC TGTGGAGTAG 

 

Protein sequence

MCGVVGYVGN KPATPIIVDG LKKLEYRGYD SSGVAVLDKD GLKVEKKMGR LAELEKALAG 
REVEATIGIG HTRWATHGRP SDVNAHPHTS NDGKIAVVHN GIIENYLQLR EWLSSQGHTF 
KSETDTEVIP HLIEHFYKGD LIEAVQKTVS HLEGSYAIMA ISVDQPGRIV AVRQDMPLVV 
GLGEGENLLA SDIPALLKHT RKCYLLNDGD VVDLRAEEVI IQDVTGKVVQ KDIFEVTWDA 
EEAEKGGYEH FMLKEINEQP RALRDTLKGR ISHAGDKVIL DEIKMTPEEV QNIKRVIITA 
CGTAYHAGLV GKYVIEQLVR VPVEVDIASE FRYRDPLVDK DTLVVVVSQS GETADTLAAL 
REARRRGARV VAITNVIASS VAREADDIIY TWAGPEISVA STKAYTTQLV AMYLLALYLA 
QERNTLAAGN IKEILDDLKS IYAKAQEVLD DIEPIKEFAE KYHKAEDTFF IGRGLDYAVA 
LEGSLKLKEI SYIHAEAYAA GELKHGTLAL IVENIPVIAL ATQQSLFEKM VSNIKEVKAR 
DASVIALAME GHTEVEKVAD QVLYIPKTHP VLAPIITVIP LQLLAYYMAV YRGCDVDKPR 
NLAKSVTVE