Gene Dred_0281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0281 
Symbol 
ID4956548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp289675 
End bp291339 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content51% 
IMG OID640179447 
Productacetolactate synthase, large subunit, biosynthetic type 
Protein accessionYP_001111655 
Protein GI134298159 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 
TIGRFAM ID[TIGR00118] acetolactate synthase, large subunit, biosynthetic type 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAGAA TGTCTGGTGC GAAGATTTTA CTTGATAGTT TAAAGGAAAT GGGTGTTGAT 
ACCATTTTTG GCTACCCCGG AGGTTCGGCT ATACCCATTT ACGATGCACT TTATGATTCT
GATATTCGCC ATATATTATG CCGCCATGAA CAGGGTGCCG TGCATGCGGC GGACGGCTAT
GCCAGAGCTT CCGGCAAGGT GGGGGTTTGC CTGGCAACCT CCGGTCCCGG AGCCACCAAC
TTGGTAACGG GGATTGCCAA TGCGTACATG GACTCCATCC CCTTGGTGGC CATTACTGGT
CAGGTACCCA CTTCCATGTT GGGGCGGGAT TCCTTTCAGG AGGCCGATAT AACGGGTATT
ACCCTACCCA TAACAAAACA TAACTACATT GTGAAAGATA TTAATGAACT GGGCAAGGTT
GTGAAAGAAG CCTTTCATAT TGCCGCCAGC GGGCGGCCCG GTCCGGTATT GATAGACATT
CCCAAGGACA TTTCTGCCGG GGAGATGGAC TATCAGCCCA ATGGTCCTGT GGACCTGCCC
GGGTACAAAC CGCCGGGCAT GGCTCGGGAA GATTTGGTTA ATCAGGCCTT TCGTTTAATC
GCCGTCAGTG AGCGACCGGT GATTTATGCC GGTGGCGGAA TTATCAGTGC TGGTGCCCAT
GAGGAACTGA AGAAATTGGC CGAAACCATT CTGGCTCCGG TGGCAACCAC CCTGATGGGG
TTAGGGGGAT TCCCCGGTGA CCATGCCTTG GCCCTGGGCA TGTTGGGTAT GCATGGTACA
AAATATGCTA ACTTTGCTAT CTGTGATTGC GATTTGCTCA TTGCTGTGGG GGTTCGCTTC
GATGACCGGG TCACCGGTAA AGTGGAGTCC TTTGCTCCCA ACGCCAAAAT TATTCATATT
GACATAGATC CCGCAGAGCT GGGGAAAAAT GTGCGGGTGG ATGTACCCAT CGCCGGCAAT
GTAAAACTGG TGTTGCAGCA ACTGTTGGAG CGGGTTCAGA CAAGGATCCC CGAGGCTTGG
CAACATAAAG TTGCCCAGTG GAAGAAGGAA TATCCCCTTG ACTTTGATGA AAACGGTGAG
GGTTTAACAC CCCAATATGT TATTCGGGAA ATCTACCGGC AGACCGGAGG AGAAGCCCGG
ATTGCCACCG AAGTGGGTCA GCACCAGATG TGGGCGGCGC ACTATTACAC CTACACCAAG
CCCCGCTCCT TTATCTCCTC CGGTGGTTTG GGGACCATGG GATATGGTTT TCCTGCTGCC
ATCGGGGTGC AGGTGGCCTG TCCGGAGGAA ACAGTTTTTG ATATTGCCGG GGATGGCAGT
ATCCAGATGA ATATTCAAGA GTTAGCCACA GCGGTGGATT ATGACCTACC TGTAAACATT
GCTGTGATGA ACAATGGTTA CTTGGGCATG GTTCGCCAGT GGCAGGAACT CTTTTATAAT
CGTCGCTATT CCTACGTTGA GATGAAAAGC CCCAACTTTG TAAAACTGGC CGAGGCCTAT
GGTGCCGAAG GCTACCAGGT AACCCGCAAG GATGAGGTTG CGGAGGTAAT GCAGGCAGCA
GTGCAATCCC GTAAACCGGT ATTAATGGAC TTTGTGGTTG AAAGAGAAGG AAACGTATTG
CCCTTTGTCC CACCGGGCAA AGCGTTAAAT GAAATGTTAG GGTAG
 
Protein sequence
MMRMSGAKIL LDSLKEMGVD TIFGYPGGSA IPIYDALYDS DIRHILCRHE QGAVHAADGY 
ARASGKVGVC LATSGPGATN LVTGIANAYM DSIPLVAITG QVPTSMLGRD SFQEADITGI
TLPITKHNYI VKDINELGKV VKEAFHIAAS GRPGPVLIDI PKDISAGEMD YQPNGPVDLP
GYKPPGMARE DLVNQAFRLI AVSERPVIYA GGGIISAGAH EELKKLAETI LAPVATTLMG
LGGFPGDHAL ALGMLGMHGT KYANFAICDC DLLIAVGVRF DDRVTGKVES FAPNAKIIHI
DIDPAELGKN VRVDVPIAGN VKLVLQQLLE RVQTRIPEAW QHKVAQWKKE YPLDFDENGE
GLTPQYVIRE IYRQTGGEAR IATEVGQHQM WAAHYYTYTK PRSFISSGGL GTMGYGFPAA
IGVQVACPEE TVFDIAGDGS IQMNIQELAT AVDYDLPVNI AVMNNGYLGM VRQWQELFYN
RRYSYVEMKS PNFVKLAEAY GAEGYQVTRK DEVAEVMQAA VQSRKPVLMD FVVEREGNVL
PFVPPGKALN EMLG