| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0280 |
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| Symbol | |
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| ID | 4956796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 287925 |
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| End bp | 289589 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640179446 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001111654 |
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| Protein GI | 134298158 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.141574 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCGCA GCGATACGAT GAAGAAAGGC CTGGAGAGAG CGCCACACCG CAGTTTGTTC
AGGGCCCTGG GGTTAATAGA CGAAGAATTA TCCCGTCCCA TGATTGGTGT GGTGAACTCC
TTTAACGAGA TTGTACCAGG TCATATGCAT TTGAGAGAAA TTGCCGAAGC AGTTAAGGCC
GGCGTTCGGA TGGCCGGCGG CACACCGGTG GAGTTTCCGG TGATTGCAGT TTGTGATGGC
ATTGCCATGG GACATCCAGG TATGAGGTAC TCCTTGGCCA GCCGTGAGAT CATTGCAGAT
TCCATTGAGG TTATGGCCCA GGCCCATCCC TTTGACGGGT TGGTGCTAAT ACCCAACTGC
GATAAGGTTG TGCCAGGCAT GTTAATGGCG GCAGCCAGAC TGAATATCCC TGCCATTGTG
GTAAGTGGGG GACCCATGAT GGCAGGTCGA TTCCAAGACA AGGATGTCTC CCTGAGTCAA
ATGTTTGAAG CAGTGGGAGC TGTGGTGGCT AATCGCATGA GCCAGGAAGA ACTGGCCGAG
TTAGAGGATC AGGCTTGTCC TGGTTGTGGT TCTTGCTCCG GCATGTTTAC GGCCAACAGT
ATGAACTGCT TAACCGAAGC ATTAGGCATG GCACTGCCCG GTAATGGTAC TGTTCCAGCT
GTCTCCGCAG CCAGGAGAAG GTTGGCTAAA ACGGCTGGTA TGAGAGCCGT GGCCCTGGTT
AAGGAAGATC TGAAACCCAG AGATATTCTC ACCCCGGAGA ACTTCCGGAA TGGGTTGGCT
GTGGATATGG CCTTGGGATG TTCCACCAAC ACAGTGTTAC ACTTACCCGC CATTGCCCAT
GAAGCAGGCC TTGATTTAGA TTTAAATTTA ATTAACGAAA TAAGCGAAAA ATCTCCCCAC
CTGTGTAAGC TCAGTCCTGC GGGAGAATAT CACATACAGG ACCTCTATGC CGCCGGCGGT
ATCCAGGCGG TCATGAAAGA GTTGTCCCTC AATGGTCTGA TTAATCTAAA CATTAAGACT
GTCAGCGGCT TGACAGTTGA ACAACTTATA GAACAGGCCA AGGTTAGAGA TTACAATGTT
ATTCGCAGTG TTCAGGAACC CTACAGTCCC ACTGGTGGGC TGGCCATCCT GAGGGGAAAT
CTTGCCCTGG AGGGAGCAGT GGTCAAGCGG GCGGCCGTAG CGCCGGAAAT GCTGCAACAT
ACAGGCCCTG CCAAAGTCTT TGATGGAGAA GAAACAGCCA TTGAGGCCAT TATGGGTGGC
CAAATCAAAG CCGGTGATGT GGTGGTAATC CGTTATGAAG GGCCCAAAGG GGGACCTGGT
ATGAGAGAAA TGCTGGGACC CACCTCGGTA TTGGCCGGCA TGGGGCTGGA CAAAGAAGTT
GCCCTTCTGA CAGACGGACG TTTCTCCGGG GCATCCCGGG GTGCTTCCAT CGGGCACATT
TCTCCGGAAG CAGCGGAAGG GGGTCTTATC GCCGTCCTTC AGGACGGGGA TATTGTGGAA
ATTGACATCC CCAATTACCG CCTCGAAGTA AAACTTGATT CGGAGGAAAT AAATCGCCGA
ATGGCTGCAT GGCAGGCACC GCAGCCCAGA GTAAAGGAAG GTTATCTGGC CCGTTATGCA
GAGAAAGTAT CCTCTGCGGG TAAAGGGGCC GTTTGTAATC GATAG
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| Protein sequence | MMRSDTMKKG LERAPHRSLF RALGLIDEEL SRPMIGVVNS FNEIVPGHMH LREIAEAVKA
GVRMAGGTPV EFPVIAVCDG IAMGHPGMRY SLASREIIAD SIEVMAQAHP FDGLVLIPNC
DKVVPGMLMA AARLNIPAIV VSGGPMMAGR FQDKDVSLSQ MFEAVGAVVA NRMSQEELAE
LEDQACPGCG SCSGMFTANS MNCLTEALGM ALPGNGTVPA VSAARRRLAK TAGMRAVALV
KEDLKPRDIL TPENFRNGLA VDMALGCSTN TVLHLPAIAH EAGLDLDLNL INEISEKSPH
LCKLSPAGEY HIQDLYAAGG IQAVMKELSL NGLINLNIKT VSGLTVEQLI EQAKVRDYNV
IRSVQEPYSP TGGLAILRGN LALEGAVVKR AAVAPEMLQH TGPAKVFDGE ETAIEAIMGG
QIKAGDVVVI RYEGPKGGPG MREMLGPTSV LAGMGLDKEV ALLTDGRFSG ASRGASIGHI
SPEAAEGGLI AVLQDGDIVE IDIPNYRLEV KLDSEEINRR MAAWQAPQPR VKEGYLARYA
EKVSSAGKGA VCNR
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