| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0275 |
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| Symbol | |
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| ID | 4958408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 278717 |
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| End bp | 281941 |
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| Gene Length | 3225 bp |
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| Protein Length | 1074 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640179441 |
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| Product | carbamoyl-phosphate synthase, large subunit |
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| Protein accession | YP_001111649 |
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| Protein GI | 134298153 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCAAAC GGAAAGAGAT CAAGACCGTA CTGGTCATAG GGTCCGGACC GATTATCATC
GGTCAGGCCG CAGAATTTGA CTATGCCGGA ACCCAGGCTT GCAAGGCTCT CCGGGAAGAG
GGCATCAGGG TGGTATTGGT TAACTCCAAC CCTGCCACCA TTATGACTGA CGCTGATATT
GCTGATGTGG TCTATGTGGA GCCCTTAACC TGGCAAAGCA TTGAAAAAAT TATTGCCAAA
GAAAAACCGG ATGGTTTATT GCCAACCCTG GGGGGGCAAA CTGGTTTGAA CATGGCTGTG
GAACTGGCTG AGCAGGGTAT CTTAGATAAA TATGGTGTTA CGCTACTGGG GACCACCCTG
GAAACCATCA AAAGGGCTGA GGACCGGGAA CTGTTTAGGG CCACCATGCT GGAGATTGGG
GAACCCATTC CAGAAAGCAC CATTGCCAGT ACACTAGAAG AATGCATTGA GTTTGCCAAC
AAGATTGGAT ATCCCTTGAT CGTTCGCCCG GCCTACACCC TGGGTGGCAC CGGGGGTGGC
ATCGTTAAGG ATGAGAAGGA ATTAACTGCC ACCTGTCACC GGGGCTTAAA AATGAGTATG
ATTAACCAGG TGTTGCTGGA ACGCAGTGTA GCCGGTTGGA AAGAGATTGA ATACGAGGTT
ATGCGGGATA ACGCTGACAA CTGTATTACC ATTTGCAATA TGGAGAACAT CGACCCGGTG
GGCGTGCATA CCGGCGATAG CATTGTGGTG GCTCCTTCGC AAACCCTGGC GGACCGGGAA
TACCAGATGC TCCGCACTGC TTCTTTAAAG ATTATCCGGG CCCTGAAGGT GGCTGGAGGT
TGCAATGTGC AGTTTGCCCT GGACCCTCAT AGTATGGAAT ACATTGTCAT TGAAGTAAAT
CCCAGGGTTA GCCGTTCCTC GGCCCTGGCT TCCAAGGCTA CGGGCTATCC CATTGCCAAG
CTGGCAGCTA AAATAGCCAT TGGACTTAAT TTAGACGAAA TAAATAACCC GGTAACTGGT
AAAACGACGG CCTGTTTTGA ACCCACCCTA GACTATGTGG TGGTAAAAAT TCCTCGTTGG
CCCTTTGACA AGTTTGCCAG TGGTGACCGG ATTCTGGGTA CCCAGATGAA GGCCACTGGG
GAAGTCATGG CCATTGACCG AAGCTTTGAG GGAGCCCTGA TGAAGGCAGT CCGCTCCCTG
GAGATTGGTG TGGACAGTAT TCAAATGAAG GGCAGTGCCA GTTGGACCGA GATGGAACTT
GAAAGTAAGC TGAGCCGCCC GGATGATGAA CGACTCTTTG TGATTGCCGA AGCCTTTCGC
CGTTACTGGA CCATGAAAGA AATTCAACAG CTTACCGGCA TTGACTACTG GTTCCTAGAA
AAGATCAAGG ATCTGGTTGT GTTAGAACAA CAAATTCGCA ATGTCGGTAG TCTGCCGGCA
CAGGATTTAT TGCGCAGGGC CAAGGCCTGT GGACTTTCAG ATGCACAAAT CGGGCGGCTT
TGTGGCAAGA CCATGCAAGA TATTCGGAAT TTGAGAAAAG CATACAACAT CCTCCCCACC
TACAAAGTGG TGGACACCTG TGCGGCGGAA TTTGAGGCGT CTACGCCCTA TTACTATTCC
ACCTACGATT GGGAGGATGA GGTGGAAGTT TCCAGTCGAA AAAAAGTGAT TGTCCTAGGC
TCCGGGCCCA TCCGTATCGG GCAGGGAGTG GAGTTTGATT ATTGCTCGGT TCACTCCGTT
TGGGGTTTGC AGAGAGAAAA GATAGAAGCT ATTATCATTA ATAACAACCC GGAAACCGTG
TCCACGGATT TTGACACCGC AGATAAGCTT TATTTTGAGC CCTTAACCAT AGAGGATGTA
ATGAATATCA TCGAGAAGGA AAAACCCCTG GGCGTGATTG TTCAGTTCGG TGGCCAGACA
GCCATTAATC TGGCCGGGGA CTTGGCCGAA ATGGGTGTCA AGATCCTAGG AACCCCCATT
GAGGGCATCG ACGCGGCGGA GGATCGGGAA AAGTTTGAAA AACTACTGAA GGGACTAGGA
ATCCCTCAAA CCGAGGGGAA AACAGCAACC AATGTTGAGG AAGCCCAGAA AATTGCCGCA
GAACTTGGTT TTCCGGTACT GGTACGGCCC TCCTATGTGC TGGGCGGGCG GGCCATGGAG
ATTGTCTATA ACGAGGATCA ACTTCTTAAA TATATGTCCA CTGCCGTGCA GGTTTCTCCC
AAGCACCCGG TACTGGTGGA TAAGTATGTC CGGGGAAAAG AGGTCGAGGT GGATGCCATT
GGTGATGGGG AGAATATTTT TATTCCTGGC ATCATGGAAC ATATTGAGCG GGCAGGTGTT
CACTCTGGGG ACAGCATTGC GGTTTATCCA CCCCAGAGCT TAAATCAGCA GGAAATGGAA
CAGGTGGTGG ATTACACCCT GCGTATAGGA AAAGGATTAA AAATTTGTGG TTTGATGAAT
ATTCAGTACG TTGTGGGGGA AGAGGGTGTC TTTGTACTGG AAGTAAATCC CCGGGCATCC
CGCACCGTGC CGGTCCTTTC CAAAGTCACC GGTGTTCCGA TGGTGCAAGC GGCCACCCGC
TGTATGCTAG GCAACAGCTT GTCAGATATG GGCTATGGTT GTGGTCTGGG GCCTGTTTCT
AATTATATAA CCGTCAAGGC CCCGGTTTTC TCCTTTGAAA AACTAAGTTT GGTGGAAACT
TCCTTAGGAC CGGAAATGAA ATCCACTGGC GAGGTGATGG GGGTTGATCA AAACTTCTCC
CATGCCTTCT ACAAGGCCAT GACAGCGGCG GGGCTAAAGG TAGCGAAAAG CGGTACAGTT
TTATTTTCTG TGGCAGAACG GGATAAATTA GAGGCCGTGG CTGTGGCCAG GCAGTATGCC
AGCTTGGGCT TTAAACTTTA TGCCACTACC CATACTGCTG CTACCTTAAG CTCTGCGGGA
CTCCCGGTGC TAAATACCGA AGATCCCCTC TCTCTGGTGC GTTCAGGCAA AGTACAAATG
GTGGTCAACA CACCCACCAA AGGAAAAGTA TCTGGCAGAC CCGGCTTTCG CCTGCGCCGG
TTAGCGTCTG AGTATAAAGT ACCCTGCTTA ACTTCCCTGG ATACGGCCCG AGCCATGGCC
GTCGTACTAA CTGATCTGTT GCAGGGGGAA CCAGTGTTGC CGGTATCCTT AAATCAATTT
ACAAAGTTTC TCAATGATAA AGAGCCGGTA CAAAATGCAG GCTAA
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| Protein sequence | MPKRKEIKTV LVIGSGPIII GQAAEFDYAG TQACKALREE GIRVVLVNSN PATIMTDADI
ADVVYVEPLT WQSIEKIIAK EKPDGLLPTL GGQTGLNMAV ELAEQGILDK YGVTLLGTTL
ETIKRAEDRE LFRATMLEIG EPIPESTIAS TLEECIEFAN KIGYPLIVRP AYTLGGTGGG
IVKDEKELTA TCHRGLKMSM INQVLLERSV AGWKEIEYEV MRDNADNCIT ICNMENIDPV
GVHTGDSIVV APSQTLADRE YQMLRTASLK IIRALKVAGG CNVQFALDPH SMEYIVIEVN
PRVSRSSALA SKATGYPIAK LAAKIAIGLN LDEINNPVTG KTTACFEPTL DYVVVKIPRW
PFDKFASGDR ILGTQMKATG EVMAIDRSFE GALMKAVRSL EIGVDSIQMK GSASWTEMEL
ESKLSRPDDE RLFVIAEAFR RYWTMKEIQQ LTGIDYWFLE KIKDLVVLEQ QIRNVGSLPA
QDLLRRAKAC GLSDAQIGRL CGKTMQDIRN LRKAYNILPT YKVVDTCAAE FEASTPYYYS
TYDWEDEVEV SSRKKVIVLG SGPIRIGQGV EFDYCSVHSV WGLQREKIEA IIINNNPETV
STDFDTADKL YFEPLTIEDV MNIIEKEKPL GVIVQFGGQT AINLAGDLAE MGVKILGTPI
EGIDAAEDRE KFEKLLKGLG IPQTEGKTAT NVEEAQKIAA ELGFPVLVRP SYVLGGRAME
IVYNEDQLLK YMSTAVQVSP KHPVLVDKYV RGKEVEVDAI GDGENIFIPG IMEHIERAGV
HSGDSIAVYP PQSLNQQEME QVVDYTLRIG KGLKICGLMN IQYVVGEEGV FVLEVNPRAS
RTVPVLSKVT GVPMVQAATR CMLGNSLSDM GYGCGLGPVS NYITVKAPVF SFEKLSLVET
SLGPEMKSTG EVMGVDQNFS HAFYKAMTAA GLKVAKSGTV LFSVAERDKL EAVAVARQYA
SLGFKLYATT HTAATLSSAG LPVLNTEDPL SLVRSGKVQM VVNTPTKGKV SGRPGFRLRR
LASEYKVPCL TSLDTARAMA VVLTDLLQGE PVLPVSLNQF TKFLNDKEPV QNAG
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