Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_0265 |
Symbol | |
ID | 4958172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 268246 |
End bp | 269061 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640179431 |
Product | cell wall hydrolase/autolysin |
Protein accession | YP_001111639 |
Protein GI | 134298143 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | [TIGR02883] N-acetylmuramoyl-L-alanine amidase CwlD |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCTGTTA TTAGGGCCTT TAGGATAAAA AAACGTTATG TGTTGGGGTT TATTACCCTT AGTATTCTGT TCTTTCAGCT ATATCAAATG GTCCTGGTTA AGATAGAAGA AAAAAATATT ACAGCACTGT CCTACGTGCT GGCCAATAAA ACCATCGTGG TGGATCCCGG GCATGGTGGC AGGGACCCGG GAAAAATTGG TCTAAGCGGC GTTCCAGAGA AAGAAATAAA CTTAGAAGTT TCTAAAAGGT TAGCCGCTGT ATTGGGGCAA ATGGGGGCAG CCATCATCAT GACCCGGGAA GCGGATGTTG ACCTGAGTGA CAGCTCAGCT TCGGGTTGGA AAAGTAAAAA GCAGCAGGAT CTAACCCGTA GAACAGATAT GGCCAATGAA AGAAAAGCAG ATTTGTATAT CAGTGTTCAC TGCAATGCCT ATACAAGCCC CAGGGAGCAT GGTGCTCAGG TCTTTTCTCA ACCGGGTTCA GAGGATAGTA AACGATTGGC GGAATGCGTC CAGTCAGAAA TGGCAGCACT ATTAAAGAAT ACAAACCGCA AGGCCAAACA GGTGGATTAT TTTGCCCTGC GTAAAACCAA GATGCCGGCA GCCATTGTAG AGATTGGTTT TATCACTAAC CCAAAGGAAG ATGAGTTGTT ACGGGACCCC CTATACCAAA GCAAAGTGGC CTGGAGTATT GCGGCGGGCA TTATAAAATA TTATGCAGAC CTGGAAGAAA GGGAAAATCA AAAAATTGAT GAGAAAAATA AAGAGATTTT GGAAACCTTT CGGCAGCAAC CGGGGCAGTA TATTCCTGCA CCCTGA
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Protein sequence | MAVIRAFRIK KRYVLGFITL SILFFQLYQM VLVKIEEKNI TALSYVLANK TIVVDPGHGG RDPGKIGLSG VPEKEINLEV SKRLAAVLGQ MGAAIIMTRE ADVDLSDSSA SGWKSKKQQD LTRRTDMANE RKADLYISVH CNAYTSPREH GAQVFSQPGS EDSKRLAECV QSEMAALLKN TNRKAKQVDY FALRKTKMPA AIVEIGFITN PKEDELLRDP LYQSKVAWSI AAGIIKYYAD LEERENQKID EKNKEILETF RQQPGQYIPA P
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