| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0258 |
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| Symbol | |
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| ID | 4958078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 258607 |
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| End bp | 260388 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640179424 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001111632 |
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| Protein GI | 134298136 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000262004 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGGTA TTCTGTTAGA GATTCAAGAA ACGGTAGAAA AGTACGCCTC CATTATGGCC
AAAATTTCAA ACTTTGACGT TGAGGTAGTG GACGCCGATC TGTTTCGCGT AGCTGGGACA
GGGATTTTTG CCCCTTTTGT AAACATGGAT ATGTCGGCGG AAGGATACGC TTACCGTCAG
GTTCTAAAAA CCGGCAAACT GCAGATCATC TATACGCCGG GCCGTGACCC CATCTGTCAG
GACTGCCCCA AGCGGCACAA CTGTACCGAG GAAATTGAAA TTGCAATGCC CATTCTTGCC
CGAGGAAAAA CCATCGGGGT AATCGGCTTG GTGGGTTCCA GCGAGTGGCA TAGAAACACT
ATTTTGCAGG ACGAGGGGAC CTACCTTGGC CTCATTGAGC AAATTGCCAA CTTTATTGCA
GCGAAAGCCA CCGAACGAAT TGACCAAAAG AAACAGGAGT CGATGCTGTC AGCATTGTCC
TGCACCATCG ACCACATGGA GCAGGGCATT TTGATTTTGG GCAGCGACCG CACAATCACC
CTTGCAAACT ATGAAGCACG TAAGCAGCTG AAGCTGGAAA TATTAGAAGG AAGCCAGGTG
AAATTAACCC CCACCCGGGA TAAAATCAAT GGCCAAAGTG AATACCTTCT CTCTGTAGCG
GAGAAGAAAA CATATATATT AGGTGAAATT TATATCCCCT TTAAGGTGGA TGAAAGCTAT
GCGGAGGTTC TGGTATTCAC CCGTTCTAAA AATCTGCATC AAAAGATGTA TGCCTTGACG
GCCGCAATTT CCACCGGCAA CATAATAGGC AGCAGCGAAG AAACCGCTGC TTTACGCATG
GAAATTGAAA AGGTAGCCAA CAGTGCCTCC ACCGTATTGA TCACCGGGGA AAGCGGCACC
GGCAAAGAGG TGGCTGCCAC CGCTATTTGG CGGGCCGGCA ACCGCCGTGA CCAGCAGTTT
GTTGCACTCA ACTGTGCGGC CATCCCAGAA AGCTTGTTGG AGTCGGAGCT GTTTGGCTAT
GTGAAAGGCG CCTTTACCGG GGCAGATCCC AACGGAAGAA TCGGCAAGTT TGAATTAGCC
AACCACGGCA TCGTCTTTTT AGACGAAATT GGGGACATGC CGCTGTATCT GCAGGCAAAG
TTGCTGCGTA TTCTACAGGA TAGAAAGATC GTTCGTATCG GTTCGAACCA GCTCATACCC
GTGGATGTAC GGGTGATTGC CGCCACCAAT AAAGACCTGA AATCAATGAT TGCCGACGGC
AAATTCCGTG AAGACCTGTA TTACCGCCTG AATGTAATTC CTTTAAACAT CCTGCCTTTA
CGGCAGCGAC AAAAGGATAT TCCGGATCTG GCTAATCTGT TCGCGCAGCG GTATGCAACC
CGTTTTGGTA AATCCCAGTG CAGAATTCCA CCTCAAACGA TGGATGCATT GTTGGCACAT
CCATGGTACG GGAATGTACG GGAACTGGAA AACACGATTG AATTTATGGT CAACATGAGC
GATGAAGAAG GCATTTTGGA TTTAGATACC CTGCCAAGAG ATTTCTTAGA GCACCAGAGG
AGAGCGGCAT ACAAACATGA TTGGAGTGCC AACCCGGCAG AAGGTTCTTT ACCGCCAACC
GATGCGCAAA CCGTCCTGCC GTTAAAAGAA GTGGAGCGCC GTGAAATCCA GAAGGCTTTA
CAGCTGTTTG GCGAAAGCAC CCAAGGCAAA AAGAGCGCTG CCAAAAGCTT GGGCATCAGC
CTGGCCACCC TGTACCGAAA GACAGAGGAG TTCTCAAAAT AA
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| Protein sequence | MAGILLEIQE TVEKYASIMA KISNFDVEVV DADLFRVAGT GIFAPFVNMD MSAEGYAYRQ
VLKTGKLQII YTPGRDPICQ DCPKRHNCTE EIEIAMPILA RGKTIGVIGL VGSSEWHRNT
ILQDEGTYLG LIEQIANFIA AKATERIDQK KQESMLSALS CTIDHMEQGI LILGSDRTIT
LANYEARKQL KLEILEGSQV KLTPTRDKIN GQSEYLLSVA EKKTYILGEI YIPFKVDESY
AEVLVFTRSK NLHQKMYALT AAISTGNIIG SSEETAALRM EIEKVANSAS TVLITGESGT
GKEVAATAIW RAGNRRDQQF VALNCAAIPE SLLESELFGY VKGAFTGADP NGRIGKFELA
NHGIVFLDEI GDMPLYLQAK LLRILQDRKI VRIGSNQLIP VDVRVIAATN KDLKSMIADG
KFREDLYYRL NVIPLNILPL RQRQKDIPDL ANLFAQRYAT RFGKSQCRIP PQTMDALLAH
PWYGNVRELE NTIEFMVNMS DEEGILDLDT LPRDFLEHQR RAAYKHDWSA NPAEGSLPPT
DAQTVLPLKE VERREIQKAL QLFGESTQGK KSAAKSLGIS LATLYRKTEE FSK
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