Gene Dred_0251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0251 
Symbol 
ID4955261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp252780 
End bp253577 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content43% 
IMG OID640179417 
Productindole-3-glycerol-phosphate synthase 
Protein accessionYP_001111625 
Protein GI134298129 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0134] Indole-3-glycerol phosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTCTGG AAAAAATTAA AGAAAAGAAA AGAGAAGAAA TTCGGCAACT ACTTCTTACT 
GCCAATGTAG CCCACATGAA AAAGAAAATT TTGGAGTTAC CCCCAGCCAG AGATTTTCGA
AAGGCCCTTT ATAATCAGGG ACAGGTAAGC CTCATTGCAG AAATTAAGAA GGCCTCCCCT
TCAAAGGGGC TGCTTTGCCC AAACTTTGAT CATCGCCAAC TGGCCCATAT ATACCAGTCC
AATGGAGCTG CAGCGTTATC AGTTTTAACA GATGAGAACT TTTTCTTAGG AAAATTGACT
TATCTGGAGG AAATAAAGCA ACAAAGCAGC CTACCCCTTC TAAGGAAAGA TTTTATTCTT
GACCCTGTGC AGCTTTATCA AAGCCGACTG GCTGGAGCAG ATGCAGTTTT ATTAATTGCC
GGGCTGCTTA CCCCCGGCGA GCTTAGTCAA TTATTTTTGT TATGCCGAGA AATTGGTATG
CAAGCATTGG TGGAAGTACA TACCCAAGAG GAATTACAAC GGGTACTGAC TACGGATGCA
AAGTTGATTG GCATTAATAA TCGGGATCTC TCCACCTTTC AAACCAATTT GGCAACCACC
GCAAAACTGC TGGAGCAGGT ACAAATAGAG GATATTACCA TTGTCAGTGA AAGTGGTATT
GCCCAAAAAG AGGATATAAA ATTTCTAAAA TCCCTGGGGG TTCATGGGGT TCTGGTGGGA
GAAGCTCTGG TAACCGCCCA GGATATTGCT AAAAAGGTGC AGGAAATTGT TGTGGCAGGC
GGAAGGGGTG AAGCTTGA
 
Protein sequence
MILEKIKEKK REEIRQLLLT ANVAHMKKKI LELPPARDFR KALYNQGQVS LIAEIKKASP 
SKGLLCPNFD HRQLAHIYQS NGAAALSVLT DENFFLGKLT YLEEIKQQSS LPLLRKDFIL
DPVQLYQSRL AGADAVLLIA GLLTPGELSQ LFLLCREIGM QALVEVHTQE ELQRVLTTDA
KLIGINNRDL STFQTNLATT AKLLEQVQIE DITIVSESGI AQKEDIKFLK SLGVHGVLVG
EALVTAQDIA KKVQEIVVAG GRGEA