| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0250 |
|---|
| Symbol | trpD |
|---|
| ID | 4956383 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 251746 |
|---|
| End bp | 252783 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640179416 |
|---|
| Product | anthranilate phosphoribosyltransferase |
|---|
| Protein accession | YP_001111624 |
|---|
| Protein GI | 134298128 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR01245] anthranilate phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATTACTG AAGCTATTCA AAAAGTTGTA GCAGGGATAA ACCTGTCTGA GGCCGAGGCG
ATGGAAACCA TGCAAGAGGT AATGGAAGGA AAGGCCACTC AGGCCCAAAT TGCCAGCCTT
TTAACAGCCC TGCATTTAAA GGGGGAAACT GTACCAGAAA TTACAGGTTT TGCACGAACC
ATGCGTACTA AGGTTATTCG AGTGCAGACC AAGCGAAGGA ATCTGGTGGA TACCTGCGGT
ACAGGTGGCG ACGGGGCCAA TACCTTTAAT ATTTCGACGG CCTGTGCCTT TGTGTTGGCC
GGCGCGGGGC TGCCTGTGGC CAAACATGGC AATCGCTCTG TTTCTAGCAA GTGCGGCAGT
GCAGATGTGC TGGAGCAACT GGGCGTTTTC GTACAGTTAA CTCCGGAGGA AGCAGGGCTT
TGCCTTGATC AAGTTGGAAT AGCCTTCCTT TTTGCACCCC TCCTGCATGG AGCCATGAAA
TACGCTGCAG CTCCTAGAAA GGAAATAGGT ATTCGTACGG TTTTTAATAT ATTAGGTCCT
CTTACCAATC CGGCCTTTGC GGAGAACCAA GTGCTAGGGG TTTATTCTTC AGACTTAGCC
CCGGTTTTAG CCCAGGTGTT GGCTAACCTG GGTACCAAGC GATCCTTTGT AATCCATGGG
TGCGGTGGCC TGGATGAAAT ATCTTTAGCC GGTGAGGCAC TGGTGTATGA AGTGAAGGAC
AATCAGGTAA AGGAAATGAT TATAGATCCC ATGGATTACG GCTTAGACAG GGCACCTATC
TCAGCCCTGG CAGGGGGAGA TGCCAAAAGG AATGCCAGAA TGATAAAAAA TATTCTAAGC
GGTGCACCGG GCCCCCAACG GGACACCATT ATTATCAATG CAGCTTTGGG ACTGATAGCC
GGTGGATTGG TAAGGGATTT GGCAATGGGT ATTCGGCTGG CGGAACAAAT TATTGATGAG
GGCTATGCCT TGAAAAAGTT AAATCTTTTG GTGGAGTTTA GCCAAACACT GGTTGGGAGG
AGGTCCGCAG CCCTTTGA
|
|---|
| Protein sequence | MITEAIQKVV AGINLSEAEA METMQEVMEG KATQAQIASL LTALHLKGET VPEITGFART
MRTKVIRVQT KRRNLVDTCG TGGDGANTFN ISTACAFVLA GAGLPVAKHG NRSVSSKCGS
ADVLEQLGVF VQLTPEEAGL CLDQVGIAFL FAPLLHGAMK YAAAPRKEIG IRTVFNILGP
LTNPAFAENQ VLGVYSSDLA PVLAQVLANL GTKRSFVIHG CGGLDEISLA GEALVYEVKD
NQVKEMIIDP MDYGLDRAPI SALAGGDAKR NARMIKNILS GAPGPQRDTI IINAALGLIA
GGLVRDLAMG IRLAEQIIDE GYALKKLNLL VEFSQTLVGR RSAAL
|
|---|
| |