Gene Dred_0233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0233 
SymbolrpmD 
ID4955408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp240417 
End bp240596 
Gene Length180 bp 
Protein Length59 aa 
Translation table11 
GC content48% 
IMG OID640179399 
Product50S ribosomal protein L30 
Protein accessionYP_001111607 
Protein GI134298111 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1841] Ribosomal protein L30/L7E 
TIGRFAM ID[TIGR01308] ribosomal protein L30, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000351817 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAAGC TGAAAATAAC CCTTGTACGC AGTCTTATCG GCAGGCCTGA GGCACAGCGG 
AAAGTTGTCC GCGCCCTTGG CTTAGGTAAG ACCAATAGTA TGGTAGAACA AAACGACAGC
CCCATTATTC GGGGTATGAT CAATAAAGTT GCTCACCTGG TTAAGGTTGA GGAAGCCTAA
 
Protein sequence
MAKLKITLVR SLIGRPEAQR KVVRALGLGK TNSMVEQNDS PIIRGMINKV AHLVKVEEA