Gene Dred_0230 details

Gene Information

• Locus tag: Dred_0230
• Symbol: rplF
• ID: 4957506
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfotomaculum reducens MI-1
• Kingdom: Bacteria
• Replicon accession: NC_009253
• Strand: +
• Start bp: 238939
• End bp: 239487
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640179396
• Product: 50S ribosomal protein L6
• Protein accession: YP_001111604
• Protein GI: 134298108
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.0000764662
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCAGGA TTGGTAAAAA GCCTATTCCA GTGCCTCAGG GTGTAGACGT GAAAATTAAC 
GGTAATGTTA TCAGCGTTAA AGGACCCAAA GGCCAATTGG AACAGGAATT CCACCAGGAT 
ATGAATATTA AGCTGGAGGA AGGCAATCTG GTGGTTGAGC GTCCCAGCGA TGCAAAAGAT 
CACAGAGCTT TACACGGTCT TACCCGCACC CTGTTAAACA ACATGGTAGA AGGAGTGACC 
AACGGCTTCC AGCGTAATCT TGAGCTGGTA GGTGTTGGTT ACCGTGCTGC CAAGCAGGGC 
AACAAGCTGG TACTGACCAT TGGTTATTCT CACCCAGTAG AAATAGAGCC CCCCGCTGGT 
ATCGAAATTG AAGTTCCTGC GGCAACTAAG ATTGCCATCA AAGGAAGCGA TAAGCAAGCG 
GTAGGGCAAT TAGCAGCGAA TATTCGTGCT GTTCGTGAAC CTGAACCATA CAAAGGTAAA 
GGTATTAAAT ACGAAAACGA AATTATTCGT CGTAAGGCTG GTAAAGCCGG CGGTAAAGGC 
AAGAAATAG 

 

Protein sequence

MSRIGKKPIP VPQGVDVKIN GNVISVKGPK GQLEQEFHQD MNIKLEEGNL VVERPSDAKD 
HRALHGLTRT LLNNMVEGVT NGFQRNLELV GVGYRAAKQG NKLVLTIGYS HPVEIEPPAG 
IEIEVPAATK IAIKGSDKQA VGQLAANIRA VREPEPYKGK GIKYENEIIR RKAGKAGGKG 
KK