Gene Dred_0227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0227 
SymbolrplE 
ID4957504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp237740 
End bp238285 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content43% 
IMG OID640179393 
Product50S ribosomal protein L5 
Protein accessionYP_001111601 
Protein GI134298105 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0094] Ribosomal protein L5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000836347 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCAAGGC TAAAGGATAA ATACCTGAAC GAAGTTCAGC CGAATCTAAT GCAAAAGTTC 
GGTTATAAGA ATATCATGCA GGTTCCTAAG CTGGAGAAAG TTATTATTAA CATTGGTCTT
GGCGAAGCCG TTCAAAACAG TAAAGCTGTT GATGCTGCTG TTGGTGATCT AATGGCTATT
ACCGGCCAAC GTCCCATTAC TACCAAAGCC AAGAAGTCTA TCGCAGCATT TAAGTTGCGT
GCAGGTATGA CAATTGGTAC TAAGGTTACC TTGCGTGGAG AGCGTATGTA TGAATTTGTT
GATAGACTGT TCAACGTTGC GCTGCCCCGG GTACGTGACT TCCGTGGGAT ATCAGATAAA
TCCTTTGACG GTCGTGGCAA CTACACCATG GGCCTGAAAG AACAACTGAT CTTCCCAGAA
ATTGAATACG ATAAAATTGA CAAGGTACGT GGTATGGATA TTACATTCGT TACCACTGCC
AAAACAGACG AAGAAGCCAG AGAGCTGCTG AAACTTATGG GCATCCCCTT TGTTAAAGTA
AGCTAA
 
Protein sequence
MARLKDKYLN EVQPNLMQKF GYKNIMQVPK LEKVIINIGL GEAVQNSKAV DAAVGDLMAI 
TGQRPITTKA KKSIAAFKLR AGMTIGTKVT LRGERMYEFV DRLFNVALPR VRDFRGISDK
SFDGRGNYTM GLKEQLIFPE IEYDKIDKVR GMDITFVTTA KTDEEARELL KLMGIPFVKV
S