Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_0227 |
Symbol | rplE |
ID | 4957504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 237740 |
End bp | 238285 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640179393 |
Product | 50S ribosomal protein L5 |
Protein accession | YP_001111601 |
Protein GI | 134298105 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000836347 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGCAAGGC TAAAGGATAA ATACCTGAAC GAAGTTCAGC CGAATCTAAT GCAAAAGTTC GGTTATAAGA ATATCATGCA GGTTCCTAAG CTGGAGAAAG TTATTATTAA CATTGGTCTT GGCGAAGCCG TTCAAAACAG TAAAGCTGTT GATGCTGCTG TTGGTGATCT AATGGCTATT ACCGGCCAAC GTCCCATTAC TACCAAAGCC AAGAAGTCTA TCGCAGCATT TAAGTTGCGT GCAGGTATGA CAATTGGTAC TAAGGTTACC TTGCGTGGAG AGCGTATGTA TGAATTTGTT GATAGACTGT TCAACGTTGC GCTGCCCCGG GTACGTGACT TCCGTGGGAT ATCAGATAAA TCCTTTGACG GTCGTGGCAA CTACACCATG GGCCTGAAAG AACAACTGAT CTTCCCAGAA ATTGAATACG ATAAAATTGA CAAGGTACGT GGTATGGATA TTACATTCGT TACCACTGCC AAAACAGACG AAGAAGCCAG AGAGCTGCTG AAACTTATGG GCATCCCCTT TGTTAAAGTA AGCTAA
|
Protein sequence | MARLKDKYLN EVQPNLMQKF GYKNIMQVPK LEKVIINIGL GEAVQNSKAV DAAVGDLMAI TGQRPITTKA KKSIAAFKLR AGMTIGTKVT LRGERMYEFV DRLFNVALPR VRDFRGISDK SFDGRGNYTM GLKEQLIFPE IEYDKIDKVR GMDITFVTTA KTDEEARELL KLMGIPFVKV S
|
| |