Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_0208 |
Symbol | |
ID | 4955409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 223489 |
End bp | 227046 |
Gene Length | 3558 bp |
Protein Length | 1185 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640179374 |
Product | DNA-directed RNA polymerase subunit beta' |
Protein accession | YP_001111582 |
Protein GI | 134298086 |
COG category | [K] Transcription |
COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00134006 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTAGAGC TAAATAACTT TGATAGTATA CGTATCGGCC TTGCCTCACC GGACAAGATT CGTCAATGGT CCAGTGGGGA GGTAAAAAAA CCGGAAACCA TCAACTACCG GACATTGAAG CCAGAACGTG ACGGTTTATT CTGTGAACGT ATCTTTGGCC CCACCAGGGA TTGGGAATGT CACTGCGGAA AGTACAAACG TGTCCGCTAC AAAGGCGTTG TCTGCGACCG CTGCGGTGTT GAAGTAACCC GCTCCAAGGT TCGCCGAGAA AGGCTAGGAC ACATTGAACT GGCAGCCCCA GTATCTCATA TTTGGTACTT TAAAGGGATT CCTAGCCGCA TGGGGTTGCT ACTGGATATG TCACCCAGAG CATTGGAAAA AGTACTGTAT TTTGTTTCTT ACATTGTTAT CGAGCCGGGC GATACTCCTC TGTTGAAAAA ACAGTTACTT ACTGAAACCG AGTATCGGGA ATATAGGGAT AAATTTGGCA ATAATTTCAA GGCAGGCATG GGCGCTGAAG CCATTAAGGT CTTGCTGGTG GAAATAAACC TGGAGGAATT GGCCAGGGAA CTGCGCCAGG AACTAAAGGA GGTTTCTGGC CAGCGTAAGA TCCGTGCCAT ACGTCGGCTG GAAGTCGTAG AGGCCTTTAA GAAATCTGGC AACCGACCAG AGTGGATGAT CATGGACGTA GTTCCAGTTA TTCCTCCAGA ACTAAGACCT ATGGTACAGT TGGATGGTGG ACGTTTCGCT ACTTCGGATT TAAATGACCT TTATCGGCGG GTTATTAACC GAAACAATCG TTTGAAACGC TTGCTTGATT TAGGCGCACC GGACATCATC GTAAGAAACG AAAAGCGAAT GTTGCAGGAA GCTGTGGATG CTCTCATCGA TAATGGACGA CGTGGCCGAC CTGTAACAGG CCCTGGCAAT CGTCCGTTAA AATCCCTGTC AGACATGCTA AAGGGGAAAC AAGGACGCTT CCGCCAAAAC CTACTGGGTA AAAGGGTTGA CTACTCCGGT CGTTCGGTTA TCGTAGTAGG ACCACGTTTA AAGATGCACC AATGCGGTTT GCCCAAGGAA ATGGCACTGG AGCTCTTCAA ACCCTTTGTT ATGAAAAAGC TGGTCAATGA TGGCCATGCC CATAACATTA AGAGTGCTAA GCGTATGGTA GAACGGGTAC GTCCGGAGGT ATGGGATGTT CTTGAAGATG TGATTAAAGA ACATCCAGTT ATGCTAAACC GTGCCCCAAC CCTACACCGT TTGGGTATTC AAGCCTTTGA GCCAGTTTTA GTAGAGGGTC GTGCCATTAA AATTCACCCC ATGGTTTGTA CAGCCTATAA CGCGGATTTT GACGGTGACC AAATGGCAGT TCACGTACCG CTGTCTGCTG AGGCTCAGGC AGAAGCTAGG CTTCTCATGC TGGCTGCTAA TAACATCCTG AACCCCAAGG ACGGCAAGCC TGTGGCCAGT CCTACTCAGG ACATGGTATT GGGTTCCTAT TACCTGACCA TGGACAGAGA TGGTGATTTA GGCGAGGGAC TGATCTTTAA AGATGAGCAG GAGGCCATGC TGGCCTATGA TAACAAGCAA GTATCCTTAC AGGCTAAAAT TACCGTACGC CGGAAAAATG GTGAGCGGTT ACAAACTACC GTTGGCAGGA TTATCTTCAA TGAGGTAATC CCCGAGGAGT TAGGATACAT TAATAAAGTT TGCGACAAAA AGACACTAAG CAAAATTGTT GCAGATTGCT ACCGCCGCCT TGGAAATGCT CATACTGCGG AACTACTGGA TGGCATTAAA GAGCTGGGTT ATAAATATTC AACCCGGGCG GGCATCACCA TTGGGGTGCC GGATATTACT ATTCCGGAAG CCAAGAAGGA GATTCTTGCC AAGGCTGAGG AGCAAGTTAA TAAGATCGAA ACCCAATTCC GTCGGGGTCT GATTACGGAA GACGAGCGTT ACCGTAAAGT AATTGGTATC TGGAATGACG CTACTGATAA AGTAACCAAA GCCTTGATGG CCACACTGGA TAAGTTTAAC AATGTTTACA TGATGGCTAC CTCTGGTGCC CGTGGTAACA TCCAGCAGAT TCGTCAGCTG GCCGGTATGC GTGGTCTAAT GGCAGACCCC TCCGGACGAA TTATTGACCT GCCAATTAAA GCAAACTTCC GGGAAGGCTT AACCGTATTG GAATACTTTA TTTCCACCCA CGGTGCTCGG AAAGGTTTGG CTGATACCGC CCTGCGTACG GCTGACTCCG GTTACTTGAC TCGCAGACTG GTGGATGTGG CCCAGGACGT TATAGTACGG GAAGATGACT GTGGCACCAC CGAGGGAATT GAAGTCAGAG AAATTAGAGA TGGTACCGAA GGTATTGAAA AACTCCATGA ACGTCTGGAA GGCCGGGTAC CAATGGAAGT GGTTGTTCAC CCAGAAACAG GGGAAGTGCT CATTTCCCAG GAGCAGGTAG ATAACCATCA AGTGATGACC GAAGAACAGG CCCAGGCCAT TGAAGACGCA GGCATTGAAA AGGTAAAAAT TAGATCGGTT ATTACCTGCA AAACCCGCTA CGGTGTGTGT AAACACTGCT ATGGTAAGAA CCTGGCAACA GGTGGCAACA TTGATATTGG TGAAGCCGTG GGTATCATTG CAGCCCAGTC CATTGGTGAG CCTGGCACAC AGTTAACCAT GCGTACCTTC CACACCGGTG GTGTAGCCGG AGATGATATT ACACAAGGTC TTCCGAGGGT TGAAGAACTG TTTGAGGCCC GTAGACCTAA GGGTCAGGCC ATTGTGGCAG AAGAGGACGG CAGCATTGCT ATACGGGAAG TAAAGGGTCG CAGGGAAATT GAAATCACCA AGGACAATGG TGAAAAGAAT GTCTATGCCG TTCCCTTTGG CGCTAGAATC AAAGTAAAAG AAGGCCAGCG CATTGAGGCC GGTGACGAAT TGACAGAGGG TTCCGTTAAC CCGCACGACC TCTTAAAGAT TAAGGGACCA GCAGGAGTGC AAGTATATCT GCTGCAGGAA GTACAAAGGG TATATCGCCT GCAGGGTGTG GAAATTAACG ACAAGCACAT CGAAGTTATG ATTCGTCAAA TGTTGAGAAA AGTGAAGATT GAAGAAGCTG GTGATACAGA ATTACTACCC GGTGGCCTTA TTGATATTTT TGAATTTGAA GAGGAAAATC GTAAGGCCGT TGAGCAAGGT GGAGAACCTG CTGTAGCCAA ACCGGTACTA TTGGGTATTA CCAAGGCTTC TCTTGCCACA GATTCCTTCT TATCCGCAGC GTCCTTCCAA GAGACCACTC GGGTACTAAC CGAAGCAGCT ATCAAAGGAA AGATGGACCC GCTGCTTGGT CTCAAAGAAA ACGTTATTAT CGGTAAGCTG GTTCCGGCAG GTACAGGCAT GTCACGCTAT CGCAATATAG AAGTGCTGGA AGAAGGTCAG CCATTCCTGG AGGAAGACAG GGATATACTG CTTCCTGAAA GGGACCGGGA CTACAACTTC CTTTCAGATG AAGAGAAGAT TGATTTCGAC CTGACACTTG AAAAATAA
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Protein sequence | MLELNNFDSI RIGLASPDKI RQWSSGEVKK PETINYRTLK PERDGLFCER IFGPTRDWEC HCGKYKRVRY KGVVCDRCGV EVTRSKVRRE RLGHIELAAP VSHIWYFKGI PSRMGLLLDM SPRALEKVLY FVSYIVIEPG DTPLLKKQLL TETEYREYRD KFGNNFKAGM GAEAIKVLLV EINLEELARE LRQELKEVSG QRKIRAIRRL EVVEAFKKSG NRPEWMIMDV VPVIPPELRP MVQLDGGRFA TSDLNDLYRR VINRNNRLKR LLDLGAPDII VRNEKRMLQE AVDALIDNGR RGRPVTGPGN RPLKSLSDML KGKQGRFRQN LLGKRVDYSG RSVIVVGPRL KMHQCGLPKE MALELFKPFV MKKLVNDGHA HNIKSAKRMV ERVRPEVWDV LEDVIKEHPV MLNRAPTLHR LGIQAFEPVL VEGRAIKIHP MVCTAYNADF DGDQMAVHVP LSAEAQAEAR LLMLAANNIL NPKDGKPVAS PTQDMVLGSY YLTMDRDGDL GEGLIFKDEQ EAMLAYDNKQ VSLQAKITVR RKNGERLQTT VGRIIFNEVI PEELGYINKV CDKKTLSKIV ADCYRRLGNA HTAELLDGIK ELGYKYSTRA GITIGVPDIT IPEAKKEILA KAEEQVNKIE TQFRRGLITE DERYRKVIGI WNDATDKVTK ALMATLDKFN NVYMMATSGA RGNIQQIRQL AGMRGLMADP SGRIIDLPIK ANFREGLTVL EYFISTHGAR KGLADTALRT ADSGYLTRRL VDVAQDVIVR EDDCGTTEGI EVREIRDGTE GIEKLHERLE GRVPMEVVVH PETGEVLISQ EQVDNHQVMT EEQAQAIEDA GIEKVKIRSV ITCKTRYGVC KHCYGKNLAT GGNIDIGEAV GIIAAQSIGE PGTQLTMRTF HTGGVAGDDI TQGLPRVEEL FEARRPKGQA IVAEEDGSIA IREVKGRREI EITKDNGEKN VYAVPFGARI KVKEGQRIEA GDELTEGSVN PHDLLKIKGP AGVQVYLLQE VQRVYRLQGV EINDKHIEVM IRQMLRKVKI EEAGDTELLP GGLIDIFEFE EENRKAVEQG GEPAVAKPVL LGITKASLAT DSFLSAASFQ ETTRVLTEAA IKGKMDPLLG LKENVIIGKL VPAGTGMSRY RNIEVLEEGQ PFLEEDRDIL LPERDRDYNF LSDEEKIDFD LTLEK
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