Gene Dred_0204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0204 
Symbol 
ID4955610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp217760 
End bp218449 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content47% 
IMG OID640179370 
Productribosomal protein L1 
Protein accessionYP_001111578 
Protein GI134298082 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0081] Ribosomal protein L1 
TIGRFAM ID[TIGR01169] ribosomal protein L1, bacterial/chloroplast 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000198509 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGAAGG AAGGCAAGAA GCTACAAGAG GCTAGAAAGC AGTTCGATAA GAACACGCTT 
TATGAACCCC TTGAGGCATT GGAAATGGTT AAAAAAACTG CTACGGCCAA GTTTGACGAA
ACCGTAGAAG TTGCTTTCCG TCTGGGGGTT GATCCCCGTC ACGCAGATCA GCAACTGAGG
GGTGCAGTTG TGTTGCCCCA TGGCACTGGT AAAACCAAAA CTGTTTTGGT TTTTGCTAAG
GGTGATAAAG CAAAAGAAGC TGAAGCTGCA GGCGCTGATT TTGTAGGTGC AGAAGATATG
TTAGAAAAAA TTCAAGGTGG CTGGCTCGGC TTTGACGTAG CCATTGCAAC CCCAGATATG
ATGGGTACCG TTGGTCGCTT GGGTCGTGTA CTTGGCCCCC GTGGCTTAAT GCCAAACCCC
AAAACTGGTA CCGTTACCTT TGAAGTTGGG GATGCAGTTA GAGATGCCAA GGGTGGTAAA
ATTACCTACC GTACTGATAA AGTAGGTATT ATCCATGCAC CTATTGGTAA GGCTTCCTTT
GACACACAAA AATTAGCTGA AAACTTCAAG ACATTGGCTG ATACCTTGGT TCGTATTAAG
CCCGCTTCTG CCAAAGGAAC TTACATGAAG ACCATTACGG TGTCTTCAAC CATGGGACCT
GGAGTTCGGA TTAACCCGAA CAAACTCTAG
 
Protein sequence
MPKEGKKLQE ARKQFDKNTL YEPLEALEMV KKTATAKFDE TVEVAFRLGV DPRHADQQLR 
GAVVLPHGTG KTKTVLVFAK GDKAKEAEAA GADFVGAEDM LEKIQGGWLG FDVAIATPDM
MGTVGRLGRV LGPRGLMPNP KTGTVTFEVG DAVRDAKGGK ITYRTDKVGI IHAPIGKASF
DTQKLAENFK TLADTLVRIK PASAKGTYMK TITVSSTMGP GVRINPNKL