Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_0188 |
Symbol | |
ID | 4955860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 203291 |
End bp | 203764 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640179349 |
Product | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
Protein accession | YP_001111562 |
Protein GI | 134298066 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.975209 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGAGTAG GCATCGGTTA TGATGTACAC AAGCTGGTAG CTGAGCGGCA ACTAGTGCTG GGGGGAGTGG TCATCCCCTA CGAGTTTGGT CTGTTAGGTC ATTCCGATGC GGATGTTTTA ATTCATGCCA TTATGGACGC ATTATTGGGG GCTGCTGCAC TGGGGGATAT TGGCCGACAT TTTCCTGACA ACGAGCCACG GTATAAAGGA ATATCGAGCA TGAAGCTTTT AGAGGAAGTA CGAGAAAAGC TGGCTGTAAA GGGCTACAGT GTAAACAACT TGGATGCCGT GGTCGTAGCC CAAGCACCCA AATTAGCACC CTATATTCAA GCCATGCAGC AAAACATTGC CCGTACGCTA CAGGTGGATT TAGACAGTGT TAATATAAAA GCAACCACCA CCGAACACCT TGGCTTTGCA GGGCGGGGAG AAGGCATTGG CGCCTATGCC GTTTGTACAC TCCAGCAGGG CTGA
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Protein sequence | MRVGIGYDVH KLVAERQLVL GGVVIPYEFG LLGHSDADVL IHAIMDALLG AAALGDIGRH FPDNEPRYKG ISSMKLLEEV REKLAVKGYS VNNLDAVVVA QAPKLAPYIQ AMQQNIARTL QVDLDSVNIK ATTTEHLGFA GRGEGIGAYA VCTLQQG
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