Gene Dred_0188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0188 
Symbol 
ID4955860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp203291 
End bp203764 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content50% 
IMG OID640179349 
Product2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
Protein accessionYP_001111562 
Protein GI134298066 
COG category[I] Lipid transport and metabolism 
COG ID[COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
TIGRFAM ID[TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.975209 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGAGTAG GCATCGGTTA TGATGTACAC AAGCTGGTAG CTGAGCGGCA ACTAGTGCTG 
GGGGGAGTGG TCATCCCCTA CGAGTTTGGT CTGTTAGGTC ATTCCGATGC GGATGTTTTA
ATTCATGCCA TTATGGACGC ATTATTGGGG GCTGCTGCAC TGGGGGATAT TGGCCGACAT
TTTCCTGACA ACGAGCCACG GTATAAAGGA ATATCGAGCA TGAAGCTTTT AGAGGAAGTA
CGAGAAAAGC TGGCTGTAAA GGGCTACAGT GTAAACAACT TGGATGCCGT GGTCGTAGCC
CAAGCACCCA AATTAGCACC CTATATTCAA GCCATGCAGC AAAACATTGC CCGTACGCTA
CAGGTGGATT TAGACAGTGT TAATATAAAA GCAACCACCA CCGAACACCT TGGCTTTGCA
GGGCGGGGAG AAGGCATTGG CGCCTATGCC GTTTGTACAC TCCAGCAGGG CTGA
 
Protein sequence
MRVGIGYDVH KLVAERQLVL GGVVIPYEFG LLGHSDADVL IHAIMDALLG AAALGDIGRH 
FPDNEPRYKG ISSMKLLEEV REKLAVKGYS VNNLDAVVVA QAPKLAPYIQ AMQQNIARTL
QVDLDSVNIK ATTTEHLGFA GRGEGIGAYA VCTLQQG