| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0186 |
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| Symbol | |
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| ID | 4956113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 201461 |
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| End bp | 202603 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640179347 |
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| Product | PilT domain-containing protein |
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| Protein accession | YP_001111560 |
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| Protein GI | 134298064 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4956] Integral membrane protein (PIN domain superfamily) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0442376 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTTCGTA AAATGATCTA TGGTCTTTTG ATTTTACTTT TCGGCAGTAT GGGGTTTTGG
GCAGGGCTGT ACAGTATTTC CAATAATCTG GTAACAGTGC CAGCTACTTT GCCTCAACTG
AAATTTGGTG TCATTGCATT GGGGGCTTTG TTAGGTGTGT TGGTGGGGGT TATTAGTACT
CCTTGGATCA TTAAAGGTGG TCTTGCACTG ACCGCAGTTG TTGATCAATA TTTAGTTAAA
ACCCCGACGC AGGATTTAAT TATGGGTGCC CTTGGACTTA TTTTTGGACT TATAATTGCT
AATTTATTAG GCGCAATTCT ATCGACCATG GGTCCTATCG GCAAGGCAAT CTGGCTGGCT
GGAACATGTT TGCTTGGTTA CTTGGGACTT TCGGTGGCAG TGAAGAAAAG GGAGGAAATC
GTCTCTTTAT TTTCTAGTTT GCCTCGTTTT GGCAAGGAGA AACTTGGAAA GGCAGAGACT
AAAGTAAACC AAACCAAATT ACTTGACACC AGTGTCATTA TCGATGGGCG AATTTCGGAG
TTGTGTCAAA GCGGCTTTGT TGAAGGGGTT TTGTTGGTTC CGGTTTTTGT AGTAGATGAA
TTAAGACATA TTGCAGATTC CGCAGATCTT TTAAAGCGGA ATAGGGGCCG CAGGGGTCTT
GATATTCTTA ATGCCATGAA AAAATCCTCC GATATAAAAG TACAAATATA CGAAAATACA
AAAGGGTTAG ATGATATACC GGAAGTAGAT GCCAAACTTG TGAAACTGGG ACAAAAGCTT
GGGGCGAAGA TTGTTACCAA CGATTATAAC CTCAATAAAG TGGCTGAACT ACAGGGAGTT
AAGGTGCTTA ACATCAATGA ACTGGCCAAT GCCATTAAGC CGGTGGTATT ACCCGGTGAA
GAAATGACTG TTACCGTTGT TAAAGATGGT AAGGAAATGG GTCAGGGTGT TGCATATCTT
GATGATGGCA CCATGATTGT TGTGGATGGT GGAAAGCGTT ATATTGGTCA AACCATTAGC
GTTTTAGTTA CCAGTGTTTT ACAGACTGCG GCGGGACGTA TGATATTTGC CAAACCAAAG
GGTTTGGATA AAAGAAGCGA AGCTACTGGA CAAGTAATAA GTGGAGTGAA TGCAATTGGG
TAA
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| Protein sequence | MVRKMIYGLL ILLFGSMGFW AGLYSISNNL VTVPATLPQL KFGVIALGAL LGVLVGVIST
PWIIKGGLAL TAVVDQYLVK TPTQDLIMGA LGLIFGLIIA NLLGAILSTM GPIGKAIWLA
GTCLLGYLGL SVAVKKREEI VSLFSSLPRF GKEKLGKAET KVNQTKLLDT SVIIDGRISE
LCQSGFVEGV LLVPVFVVDE LRHIADSADL LKRNRGRRGL DILNAMKKSS DIKVQIYENT
KGLDDIPEVD AKLVKLGQKL GAKIVTNDYN LNKVAELQGV KVLNINELAN AIKPVVLPGE
EMTVTVVKDG KEMGQGVAYL DDGTMIVVDG GKRYIGQTIS VLVTSVLQTA AGRMIFAKPK
GLDKRSEATG QVISGVNAIG
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