Gene Dred_0170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0170 
Symbol 
ID4956337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand- 
Start bp178120 
End bp178776 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content44% 
IMG OID640179323 
Productnitrite and sulphite reductase 4Fe-4S region 
Protein accessionYP_001111544 
Protein GI134298048 
COG category[C] Energy production and conversion 
COG ID[COG1251] NAD(P)H-nitrite reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.000000562275 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGAAT CCCCCAAAAA TGCTATCTTA CAACGTGATA ATACCTATGC AATTATCCCT 
AAAACTGGTT TCGCCGGGTT ATTAAACGGT GACTCCTTAC GTAAGTTGGC CGATGTTGTG 
GACAAGTATC AAATTCCGGT GATAAAGATG ACTGCTTCCC AACGAATCGC ATTGGTGGGC 
ATTAAAGAAG AAGATGTAAA CAAAGTATGG GCAGACCTCG GAATGGAAGC TGCACCTGCC 
ACAGGTCTCT GTGTAAGAAG TGTGCAATCC TGTCCAGGAA ATTCCCTGTG CAAATATGGT 
AAACAGGATT CCTTAGGACT GGCCCAAAGG CTAGATGAAC TTTTCTCTGG CATAGCATTG 
CCTAATAAAT TTAAAATGGG TATTTCTGGA TGCCCATTAA ATTGTTGCGA AGCTTGGACG 
AGGGATTTTG GGGCCTTTGG AAAACCAAAT GGCTTCACCG TTGTGATTGG CGGCAACGCC 
GGTGCCGCTC CCCACATTGG TAAAGTGCTG GCAGAGGGCC TGAGTATAGA AGAGGTTGTA 
TCCCTGGCTG GTCGGTTAAT TAGTTATTAT AAAGAGAATG CTAAGAACGG CGAGAGAATG 
TTTAAATTTG TAGAGCGACT GGGCATTGAA GAAATACAAA AGGTCACCTT AGCTTAA
 
Protein sequence
MSESPKNAIL QRDNTYAIIP KTGFAGLLNG DSLRKLADVV DKYQIPVIKM TASQRIALVG 
IKEEDVNKVW ADLGMEAAPA TGLCVRSVQS CPGNSLCKYG KQDSLGLAQR LDELFSGIAL 
PNKFKMGISG CPLNCCEAWT RDFGAFGKPN GFTVVIGGNA GAAPHIGKVL AEGLSIEEVV 
SLAGRLISYY KENAKNGERM FKFVERLGIE EIQKVTLA