Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_0161 |
Symbol | panC |
ID | 4957061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 169992 |
End bp | 170837 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640179314 |
Product | pantoate--beta-alanine ligase |
Protein accession | YP_001111535 |
Protein GI | 134298039 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0414] Panthothenate synthetase |
TIGRFAM ID | [TIGR00018] pantoate--beta-alanine ligase [TIGR00125] cytidyltransferase-related domain |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.253183 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACTAT TTAAAACTGT TGATGAAGTA CGTTCTTTTA TAAATTCAGT ACGCAGGGAA GGAAAAACCG TTGGGTTGGT CCCCACCATG GGTTATTTAC ACCAGGGGCA CCTTAGCCTG GTACACGAGG CCAAGCGTAG TTGTGATGTT GTGATTGTCA GTATTTTTGT TAACCCGACC CAATTTGACC CCAATGAGGA TTACCAGACC TATCCAAGGG ATTTGCAGCG GGATGTAGCG TTGGTTGCTG ATGCCGGTGT GGAAGCTATC TTTGCTCCGG AGGCCGAGGA AATGTACTCC CAGGGCTTTA GTAGTTTTGT AGATGTTACA GGGGTTAGTG AATGCCTCTG CGGGGCATCA CGCCCGGGGC ATTTTCGGGG TGTAGCAACA GTGGTTACGA AACTTTTTAA TATTGTTTTG CCCGATGCTG CTTTCTTCGG GCAGAAAGAT TTTCAGCAGG TAATGGTTAT TAAACGAATG GTTGCAGATT TAAATATGAG CGTGCAAATT ATTGATGTGC CCATTGTACG GGAAGAAGAT GGACTGGCCC TAAGTTCTCG CAATGTTTAT CTCTCACAGG AAGAAAGAAA GGCAGCATTG GTTTTACACC GTAGCTTACA TTTAGCCAAG GAGCAGGTAA ATGAGGGAGA ACGGAGTGCT CAGCAAATCA AAGAGCGGAT AATCAAGGAA ATCCAGGCCG AACCCCTTGC TAATATTGAT TACGTTGAAA TCCTTTCCGT TCCAGATCTT AAACCTATAG AAATAATCAA GGGAAATGTG CTTTTGGCAC TGGCTGTACG GTTTGGAAAA ACCAGACTAA TTGATAATTC TATTTTGGAG GCATAA
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Protein sequence | MRLFKTVDEV RSFINSVRRE GKTVGLVPTM GYLHQGHLSL VHEAKRSCDV VIVSIFVNPT QFDPNEDYQT YPRDLQRDVA LVADAGVEAI FAPEAEEMYS QGFSSFVDVT GVSECLCGAS RPGHFRGVAT VVTKLFNIVL PDAAFFGQKD FQQVMVIKRM VADLNMSVQI IDVPIVREED GLALSSRNVY LSQEERKAAL VLHRSLHLAK EQVNEGERSA QQIKERIIKE IQAEPLANID YVEILSVPDL KPIEIIKGNV LLALAVRFGK TRLIDNSILE A
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