Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_0160 |
Symbol | panB |
ID | 4955298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 169148 |
End bp | 169981 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640179313 |
Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
Protein accession | YP_001111534 |
Protein GI | 134298038 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.212957 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACAAAA AGGTAACTAC TGCCGACTTT CGGCGCATGA AACAGGAAGC CAAACCAATA GCCATGTTAA CCGCTTACGA TTATCCGACG GCTATGTTGG TCGATGCTTC TGGTATAGAC GGCATCCTGG TTGGGGATTC CCTCGGTAAT GTGGTTCTGG GGTATGATTC CACTGTGCCT GTAACCATGG ATGATATGAT TCACCACCTT AGGGCGGTTA CCCGTGGTGC AAAGAGGGCT CTGGTGGTAG GGGATATGCC CTTTTTATCC TATCATATCT CCCGGGAAGA AAGTGTTCGT AATGCTGGTC GATTAATGCA AGAAGGTTTA GCCCAGGCGG TTAAATTGGA GGGTGGTCGT GAGGTAGCCG ACACCGTGAA AGCAATTACT GAAGCGGGCA TCCCGGTAAT GGGTCATCTA GGACTTACAC CCCAATCTGT GCATCAGATG GGTGGTTATA AGGTGCAGGG AAAGGATGGC GAGGCTGCCC GGAGATTGCT TGAGGATGCC AAAGCCTTGG AAGCCGCAGG GGTCTTTGCC ATTGTACTGG AGTGTATTCC TCAACAACTA GCGAAGGTGG TCACCGAAGC GGTAAAGGTA CCAACCATTG GTATTGGTGC AGGAAGTGAT TGTGATGGCC AAATTCTGGT GACCCATGAT CTTTTAGGAA TGTTTTCCGA TTTTACACCT AAATTTGTTA AAAAATATGC CAATCTAAAG GAACAAATTA TAAAGGCCTG TGAGGATTAT CAACAAGAAG TAAGAGATAA GGCATTTCCT GGTCCCGGGC ATGTCTTCAA CATGGCCGAT GAGGAATTAA AAAAGATTTA TTAG
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Protein sequence | MNKKVTTADF RRMKQEAKPI AMLTAYDYPT AMLVDASGID GILVGDSLGN VVLGYDSTVP VTMDDMIHHL RAVTRGAKRA LVVGDMPFLS YHISREESVR NAGRLMQEGL AQAVKLEGGR EVADTVKAIT EAGIPVMGHL GLTPQSVHQM GGYKVQGKDG EAARRLLEDA KALEAAGVFA IVLECIPQQL AKVVTEAVKV PTIGIGAGSD CDGQILVTHD LLGMFSDFTP KFVKKYANLK EQIIKACEDY QQEVRDKAFP GPGHVFNMAD EELKKIY
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