Gene Dred_0159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0159 
Symbol 
ID4955274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp168265 
End bp169296 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content48% 
IMG OID640179312 
Product6-phosphogluconate dehydrogenase, NAD-binding 
Protein accessionYP_001111533 
Protein GI134298037 
COG category[S] Function unknown 
COG ID[COG5495] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.981834 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTGCA AGCCTTCCTT TGCAATTATT GGTGCAGGTA AAGTGGGTAG CGCCATAGGA 
GTGCTGCTAA AAGAAAGGGG TTATGCTCCA GTAGGTGTTT ATAGTCGATC CAAAACGTCT
GCCCGGAGGT TAGCAGACCA ACTCCATTCA AAGTTATATA AAAATGCCGT AGATGCAGCC
AAGGCTGCGG ACCTGGTTTT TATAACAACC ACAGACAGGG AAATAGGCAC CACAGCAGCA
ATTATCGCCC GTAAGGGTGG ATGTAAACCA GGGCAGATTG TAATTCATAC CAGTGGAGCC
TTAGCCAGCG ATGTGATGGA ACCGGTACGG GAACAGGGGG CGTGGGCGGT ATCTGTTCAC
CCGCTGCAAT CCTTTGCCAG TATAGAAAGC GCCAAAGAGA ATTTACCCGG ATCTTCCTTT
GCGCTGGAAG GTGATGAACA GGCACTACCC CTTGCCGAGA AAATGGTAAA GGATCTACAA
GGTCGTTATT TTATTATTAA AGCAGCGGAT AAACCACTTT ACCATGCGGC GGCGGTGATT
GCTTCTAATT ACCTCGTTTC TCTTATGCAT CTAAGTGCAT CCATATACCG TCAGTTGGGA
CTGGATGAAG AACAAGCCAG GGACGCTTTG TTTCCACTTA TTCAGGGAAC ACTAAACAAT
ATTGCTAAGG TAGGGCCTGC ACAGGCCCTT ACCGGCCCTG TTGCCAGAGG CGACGCTAGT
ACAGTAAAGG GACATATCAG TGCACTTTCC AGAATGAATT GGCGAACCCA AGAAGTCTAC
CGTAGTCTAG GCTTATACAC GGTGGGGTTG GCCTTAGAAA ACGGAAGTAT TACAACCAAT
GAGGGTGCAG CCCTCAGTAA TATTTTTTTG GAGGTAGAAA ACTGTGAACA AAAAGGTAAC
TACTGCCGAC TTTCGGCGCA TGAAACAGGA AGCCAAACCA ATAGCCATGT TAACCGCTTA
CGATTATCCG ACGGCTATGT TGGTCGATGC TTCTGGTATA GACGGCATCC TGGTTGGGGA
TTCCCTCGGT AA
 
Protein sequence
MNCKPSFAII GAGKVGSAIG VLLKERGYAP VGVYSRSKTS ARRLADQLHS KLYKNAVDAA 
KAADLVFITT TDREIGTTAA IIARKGGCKP GQIVIHTSGA LASDVMEPVR EQGAWAVSVH
PLQSFASIES AKENLPGSSF ALEGDEQALP LAEKMVKDLQ GRYFIIKAAD KPLYHAAAVI
ASNYLVSLMH LSASIYRQLG LDEEQARDAL FPLIQGTLNN IAKVGPAQAL TGPVARGDAS
TVKGHISALS RMNWRTQEVY RSLGLYTVGL ALENGSITTN EGAALSNIFL EVENCEQKGN
YCRLSAHETG SQTNSHVNRL RLSDGYVGRC FWYRRHPGWG FPR