Gene Dred_0154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0154 
Symbol 
ID4955742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp164123 
End bp165322 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content47% 
IMG OID640179307 
Productdihydropteroate synthase 
Protein accessionYP_001111528 
Protein GI134298032 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0294] Dihydropteroate synthase and related enzymes 
TIGRFAM ID[TIGR01496] dihydropteroate synthase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.465574 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTATAG AAATAGGAGT TAAGTTTATC GATAATCTGG AGCAAGCCAG GTTGGAGATT 
CAGGATGTGG GTAGTGACCA GGGTGGTTGG CAGCGTATGG CTCCCAAAGC GGTGCATAGG
GTAATAAAGT TAACGGATGT AAGCCCTACC CAGGCCAATA TCATTAAGCA GGAGATATTA
GCCAGGGGCG GTGAAGCTGC AGTGGCCCGT GGTGTGGTAA ACCATTCGGT TGAAAAAACA
GATGTTTTAC TAATGGCCAG CCTTAAGCAG TACAGAGGAT TTGTGGACAA GCTTAGAATG
CAGCCCTTTG GTTTAGCAAA GCTGGCAGAA AGACTGGCAG AAGCCCTGGG CAATCTTGAA
GGAGTAAAAG TTAGAAAACT AAACTGCCGG GGAAAGGTCT TGGAGTTGGG CCAGAGAACC
CGGGTTATGG GGATTTTAAA CATCACACCA GACTCCTTTT CGGATGGGGG GCGTTATATG
GAAGTGGAGT CTGCCCTGGA ACATGCCTTG AGAATGATGG AAGAAGGGGC AGACATCATT
GATTTGGGTG GAGTATCCAC CCGGCCCGGT TATTCTGAAG TTACTGAGGA TGAAGAAAAA
CGAAGGGTAG TACCTGTTTT AGAAAAACTT TTACAGGCTG TACCGGTACC GATTAGCCTT
GACACCTGGC GGGCCGGAGT GGCGAAAGAG GCATTAGAAG CTGGTGTTCA TATCATTAAC
GATCAATGGT CCCTTAGGGG CGATCCAGGT TTGGCAGCGG TGGTAGCTAA GTACCAGGCT
CCCATTATAA TGATGCACAA CGGCTATAAT ACAAACTATG GGGATATAAT GATGGAGGTT
CTTCATTTCC TGCGTGTAGG TATTGATATA GCAGAGGAGT CCGGCATTTC AAGGCAGAAT
ATCATTGTGG ACCCGGGTAT AGGTTTTGCT AAAACCTATG AACAAAATTT AGAAGTTCTT
CGGAGAATGA AAGAGCTAAC TGTTCTTGGT TGTCCTATAT TGTTAGGAAC ATCTCGTAAA
TCAGTAATTG CAAAGACCCT CAACCTTCCG GTGGACCAGC GGGTAGAAGG TACTGGAGCC
ACAGTGGCCT TGGGAATTGC CTGTGGAGCA GATATCGTAA GGGTACATGA TGTGAAAGCA
ATGGTGAGGG TGGCAAAAAT GAGTGATGCC ATACTACGGG GGGTTAACTG TGAAGGATAA
 
Protein sequence
MSIEIGVKFI DNLEQARLEI QDVGSDQGGW QRMAPKAVHR VIKLTDVSPT QANIIKQEIL 
ARGGEAAVAR GVVNHSVEKT DVLLMASLKQ YRGFVDKLRM QPFGLAKLAE RLAEALGNLE
GVKVRKLNCR GKVLELGQRT RVMGILNITP DSFSDGGRYM EVESALEHAL RMMEEGADII
DLGGVSTRPG YSEVTEDEEK RRVVPVLEKL LQAVPVPISL DTWRAGVAKE ALEAGVHIIN
DQWSLRGDPG LAAVVAKYQA PIIMMHNGYN TNYGDIMMEV LHFLRVGIDI AEESGISRQN
IIVDPGIGFA KTYEQNLEVL RRMKELTVLG CPILLGTSRK SVIAKTLNLP VDQRVEGTGA
TVALGIACGA DIVRVHDVKA MVRVAKMSDA ILRGVNCEG