| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0143 |
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| Symbol | |
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| ID | 4956930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 153798 |
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| End bp | 156830 |
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| Gene Length | 3033 bp |
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| Protein Length | 1010 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640179296 |
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| Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
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| Protein accession | YP_001111517 |
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| Protein GI | 134298021 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG1148] Heterodisulfide reductase, subunit A and related polyferredoxins
[COG2768] Uncharacterized Fe-S center protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTACAA CCAATAAAGT AGGAGCTGTG TTGGTAGTGG GCTCCGGGAT AGCCGGTATC
CAGGCATCCC TGGACTTAGC TGAATCCGGT TACTATGTAT ACCTGGTGGA AAGAGAGCCG
GCCATTGGTG GTACCATGCC CATGCTGGAT AAAACCTTCC CCACTAACGA CTGCTCCATG
TGTATTCTAT CTCCCAAACT AGTAGATTGT GGGAGACACC TGAACGTAAA CAGCATGACC
AACTCAGAAG TAGTTGGACT GGAAGGGGAA CCAGGAAACT TTAAGGTAAC CATACGGACC
AAAGCCCGTT ACATCGACGT AAATAAATGT ACAGGCTGTG GCAGCTGCGC CGAGGCCTGT
CCAGTGAAAG TAGACGACGC CTTTAACCAG GGTTTAAACA AACGGAAAGC CATCTACAAG
CTGTACGCCC AGGCATTCCC CAATGCCTAT GCCATAGACA GCAGTAAATG CTTAAAATTC
AAAAACCTAA GCAATGACAA ACTCTGTGGG AAATGCATAA AAGCATGTCA GGCTGGGGCC
ATTAACCACC ACATGCAGGA TGAAGAAACC CAAATTGAAG TAGGTTCTAT CGTGCTGGTA
CCGGGCTTTG AAGCCTTTGA CCCAACCCAA CTTGAATTAT ATCAATACGG TAAACTGAAA
AACGTAGTAA CCTCCCTGGA ATTTGAAAGA ATCCTGAGTG CCTCTGGACC CTTTGGAGGA
CACCTCATAC GCCCCAGTGA CCATAAAGAA CCTCAAAAAG TTGCCTGGAT CCAATGCGTG
GGTTCCCGGA ACTGCCGGAT AGGTAATGGC TACTGTTCCT CAGTATGCTG TATGTACGCA
ATCAAACAGG CAGTTATTGC CAAGGAACAC ACCCCGTACG ACCTAGGAGC CTCCATATTC
TACATGGACA TGCGGACCTA CGGTAAAGAC TTTGAAAAAT ACTACGAACG TTCCAAAGCC
CAATATGGCG TAAACTTTGT ACGTAGCCGT GTATACAGCC TAGACCTTGG TGAAAATGAC
AACGTAAAAA TACGCTATGC CTTAGAAGAT GGCACCGTAA TAACCGAAGA ATACGATATG
GTGGTACTGT CGGTGGGTTT AGAACCCCAC AAAGCAGCTG TAGAACTGGC AAAAACACTG
GGAGTTGAAC TGAACCAATA CAACTTTGTG GATGTACCAG AACTAAGTGG AGTTGCTACC
AACAAGCCCG GCGTATACGT AGCAGGTGCT TTCAGCGGCC CCAGAGACAT TCCGGAAACC
GTTATGCAGG CCAGTGCAGC AGCAGGAGAA GTACAAAAAC TGCTGGCAGA AGCCAAAGGG
ACCCTGACCA AAACCAAAGA ATACCCGGCA CCCAAAGATG TGTCCGGTGA AATAGTACGG
ACCGGCGTAT TTGTCTGCCA CTGCGGTATA AACATCGGCG GTGTGGTAGA CGTACCCTCG
GTAGCCGAAT ATGCCAAGAC ACTACCTGGC GTAGTATACG CCACCGAAAA ACTGTACGCC
TGTTCCCAGG ACGCCAGTGC CCAGATCAAA GAAGCCATAG AAGAACATGG CCTAAACCGG
ATTGTGGTGG CCTCCTGTAG CCCGCGTACC CACGAACCCA TGTTCCAAGA GACCTTAAAA
GAGGCAGGAC TGAACCCGCA CCTCTTTGAA ATGACAAACA TCCGTGACCA CTGCTCCTGG
GTACACCAGA ACGAACCTGA AAAGGCCACC GAAAAAGCCA AAGACCTAGT AAAAATGGCT
GTTAAAAAAG CAGCCCTGCT GGAACCCGTA CACCCCATTA CCCTGCCCAT GAACCATGAT
GTACTGGTCA TTGGAGGCGG CGTATCTGGC TTAACCTCTG CCCTGAATCT GGCTGACCAG
GGCTACCAAG TATATATAGT AGAAAAAGCT GAAGAACTGG GTGGTATCGC CAAACGTATT
AAGTATGGTA TGGGCGGCGA AGATGTACCA GCCTACCTTA ACGAACTAAT TGGCAAAGTA
AATAGCCATA CAAAGATTAA AGTCTATACC AGCGTAGAAA TAGCTGATGT ACAGGGCTTT
ATGGGCAACT ACCAAACCAA ACTGACCAAC GGTGAAGAAA TTAAACATGG TGTAGTCATC
ATAGCCACCG GCGCTGCTGA ATACCAGCCC ACGGAATACC TGTATGGCCA CAACACCCGA
GTACGCACCC TGCTGGAAGT AGAAGGAATG CTGGCAGACG GTAAACTGCA AAACGCCAAC
AACTATGTCT TTATCCAATG CGTGGGCAGC CGCGATGACG AGCGACCCTA CTGCAGCCGG
ATTTGCTGTA CTAAGTCCAT CAAACTGGCT CTGAAAGTAA AAGAAGCTAA ACCAAGTGCC
AACGTCTACA TTCTCTACCG TGACATCCGT ACCTACGGCT ACTTCGAAGA CCTGTACACC
GAAGCCCGCC GTAAAGGAGT CGTCTTTGTA CGCTACAGTG TGGATGCCAA ACCGGTAGTA
GAAGGAACCA GCTTTGGTAC CAAAGTAACC TTTACAGATC ATGTTCTAAA CCGTCCCGTA
GAAATCTACG CAGACATTAT CGGACTGGCC ACAGCCATTG TACCCAACGA TAACACATCC
CTGTCCAAAC TATTTAAAGT GCCCATCAAC GCAGAAGGCT TCTTCTTAGA AGCCCACATG
AAATTGCGTC CGGTGGACTT TGGAACGGAC GGAGTATTCA TGTGCGGACT AGCCCATGGA
CCGAAAAACC TGGAAGAAAA CATTTCCCAG GCAAAAGCGG CAGCCGGACG TGCCGTTACA
GCCTTGGCCA AGGAAAACAT CGAAACAGAT GGTAAAGCAG CCTATGTTGA CAAACGGAAA
TGTATGGCCT GCGGTGTCTG CGTAGAAGTA TGCCCGGCCA AAGCAGCAAC CCTAGTAACC
GATGAGAGAG GCAACACCGC AGCAGATATT AACCCGGCCT TGTGCAAAGG TTGTGGAGCA
TGCTCCTCCT CCTGCCGTTG CGGAGCCATC AACGTAAAAG GCTGCAGCAA CGAACAACTC
ATGGCCATGG TACAGGCGGT GGCCTGGCAG TAG
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| Protein sequence | MTTTNKVGAV LVVGSGIAGI QASLDLAESG YYVYLVEREP AIGGTMPMLD KTFPTNDCSM
CILSPKLVDC GRHLNVNSMT NSEVVGLEGE PGNFKVTIRT KARYIDVNKC TGCGSCAEAC
PVKVDDAFNQ GLNKRKAIYK LYAQAFPNAY AIDSSKCLKF KNLSNDKLCG KCIKACQAGA
INHHMQDEET QIEVGSIVLV PGFEAFDPTQ LELYQYGKLK NVVTSLEFER ILSASGPFGG
HLIRPSDHKE PQKVAWIQCV GSRNCRIGNG YCSSVCCMYA IKQAVIAKEH TPYDLGASIF
YMDMRTYGKD FEKYYERSKA QYGVNFVRSR VYSLDLGEND NVKIRYALED GTVITEEYDM
VVLSVGLEPH KAAVELAKTL GVELNQYNFV DVPELSGVAT NKPGVYVAGA FSGPRDIPET
VMQASAAAGE VQKLLAEAKG TLTKTKEYPA PKDVSGEIVR TGVFVCHCGI NIGGVVDVPS
VAEYAKTLPG VVYATEKLYA CSQDASAQIK EAIEEHGLNR IVVASCSPRT HEPMFQETLK
EAGLNPHLFE MTNIRDHCSW VHQNEPEKAT EKAKDLVKMA VKKAALLEPV HPITLPMNHD
VLVIGGGVSG LTSALNLADQ GYQVYIVEKA EELGGIAKRI KYGMGGEDVP AYLNELIGKV
NSHTKIKVYT SVEIADVQGF MGNYQTKLTN GEEIKHGVVI IATGAAEYQP TEYLYGHNTR
VRTLLEVEGM LADGKLQNAN NYVFIQCVGS RDDERPYCSR ICCTKSIKLA LKVKEAKPSA
NVYILYRDIR TYGYFEDLYT EARRKGVVFV RYSVDAKPVV EGTSFGTKVT FTDHVLNRPV
EIYADIIGLA TAIVPNDNTS LSKLFKVPIN AEGFFLEAHM KLRPVDFGTD GVFMCGLAHG
PKNLEENISQ AKAAAGRAVT ALAKENIETD GKAAYVDKRK CMACGVCVEV CPAKAATLVT
DERGNTAADI NPALCKGCGA CSSSCRCGAI NVKGCSNEQL MAMVQAVAWQ
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