Gene Dred_0132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0132 
Symbol 
ID4956538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand+ 
Start bp139014 
End bp140039 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content49% 
IMG OID640179286 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_001111507 
Protein GI134298011 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGTTA AAATCTCGAT TAATGGTTTT GGACGTATTG GCAGAAATGT ACTGAGGGCC 
ATGCTGAAAA AGGATCTTGT TCGGGCGGGA TCTCCTGTGG AAATTGTTGC GGTTAACGAC 
TTGACAGACC CACAAACCCT GGCTCACTTG CTAAAGTATG ATTCTGTACA TGGTGAGTTA 
GCTGCTGAGG TAGCCTGCAC GGAAGATACC CTGCTGGTAA ACAATGTTGA AATTAAAGTT 
TGTGCCGAAA CTGACCCTGC TAAACTGCCC TGGGGCAAAT TGGGTGTTGA TATTGTTATA 
GAATCCACTG GTCGTTTTAC TAAAGGTCCG GATGCAGCCA AACACATCCA AGCCGGTGCT 
AAGAAAGTGA TTATTTCCGC GCCAGGTAAA GAAGTGGATG CCACCATTGT GATGGGTGTT 
AATGACCATA CCTATGACCC AGCCAATCAT CATGTGATTT CTAACGCTTC TTGCACAACC 
AACTGTTTGG CTCCCTTTGC TAAAGTGCTT CATGACAAAT TCGGTATTGT TAAGGGCTTG 
ATGACCACTG TTCATTCCTA CACCAATGAT CAGCGTATTT TGGACTTACC CCACAAGGAT 
TTGCGCCGGG CCCGGGCTGC GGGACAATCC ATCATTCCCA CCACCACCGG TGCCGCTAAG 
GCTGTGGCCC TGGTACTGCC GGAGCTAAAG GGTAAGCTAA ACGGTTTTGC CATGAGGGTT 
CCCACCCCCA ACGTATCTGT GGTAGACCTA GTGGTTGAGT TGGCCCAACC CACCACTGCC 
GAAGAAATTA ATGCTGCTTT AAAAGAGGCT GCGGAAGGCA CGATGAAGGG TATTCTGGCC 
TTCAACGCCT TACCGTTGGT ATCCAGAGAT TTCAACGGCA ACCCCAACTC TTCCATCATT 
GATGGCTTAT CTACCATGGT TATGGAAGGC AATATGGCCA AAGTGGTTTC CTGGTACGAT 
AACGAGTGGG GTTACTCCAA CCGTGTGCTG GATTTGGCGC TGATGCTGGC CCAAAAGGGG 
TTGTAA
 
Protein sequence
MTVKISINGF GRIGRNVLRA MLKKDLVRAG SPVEIVAVND LTDPQTLAHL LKYDSVHGEL 
AAEVACTEDT LLVNNVEIKV CAETDPAKLP WGKLGVDIVI ESTGRFTKGP DAAKHIQAGA 
KKVIISAPGK EVDATIVMGV NDHTYDPANH HVISNASCTT NCLAPFAKVL HDKFGIVKGL 
MTTVHSYTND QRILDLPHKD LRRARAAGQS IIPTTTGAAK AVALVLPELK GKLNGFAMRV 
PTPNVSVVDL VVELAQPTTA EEINAALKEA AEGTMKGILA FNALPLVSRD FNGNPNSSII 
DGLSTMVMEG NMAKVVSWYD NEWGYSNRVL DLALMLAQKG L