Gene Dred_0130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0130 
Symbol 
ID4956454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand+ 
Start bp137162 
End bp137785 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content42% 
IMG OID640179284 
Productglycerol-3-phosphate responsive antiterminator 
Protein accessionYP_001111505 
Protein GI134298009 
COG category[K] Transcription 
COG ID[COG1954] Glycerol-3-phosphate responsive antiterminator (mRNA-binding) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.198198 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAACA TTTTAATAAT AGACTTATTT TTAGTGGTTA GGGGGAAGGA TATGGAGTTT 
TTAACAAAAG TAATGGGCCA AAGCCATATA GGAGCGGCTA TCCGGCGGGT TGAAGATCTG 
GAAGAGGCCA TTCGACATCC CAGAGTCCAT GCTATATTTC TTTTAGGTGG GGATATTAAT 
TATCTCCCGG GAATGATTAA AAAGGTACGT GCCTCAGAGA AGATGTTGCT TACACATATA 
GATTTGGTTG AAGGTATTGG CAAAGATCGG GCAGGGCTTC ATCTCATCAA GAGAATGGGT 
GTACAGGGGA TTGTTACCAC CAAATCAAAT CTAGCAAAAT TTGCAAAGGA GGAAGGGCTT 
TGGGTGGTGC AGCGCTTATT TATTGTAGAT TCCGAATCCG TTAAAACTGC TGTTCGGGTG 
GCAGAAAATA TTAAGCCCCA TGCAGTGGAA GTATTGCCGG CAACAATTCC CCAATATGTG 
ATTCAGGACA TAAAAAAATC CCTTAGGCTT CCTGTTTTGG GGGGAGGCCT ATTGAAAACA 
GAATCGGATG TTAAAGAAAC CATTGGTAAA GGCATTGATG CCATCACAAC CAGTCTAAGG 
CATCTTTGGA ATGTTGCTTT GTAA
 
Protein sequence
MKNILIIDLF LVVRGKDMEF LTKVMGQSHI GAAIRRVEDL EEAIRHPRVH AIFLLGGDIN 
YLPGMIKKVR ASEKMLLTHI DLVEGIGKDR AGLHLIKRMG VQGIVTTKSN LAKFAKEEGL 
WVVQRLFIVD SESVKTAVRV AENIKPHAVE VLPATIPQYV IQDIKKSLRL PVLGGGLLKT 
ESDVKETIGK GIDAITTSLR HLWNVAL