Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_0127 |
Symbol | ndk |
ID | 4956371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 134129 |
End bp | 134578 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640179281 |
Product | nucleoside diphosphate kinase |
Protein accession | YP_001111502 |
Protein GI | 134298006 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0105] Nucleoside diphosphate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00040387 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCGTA CTTACTTAAT GGTCAAGCCT GATGGAGTCC AAAGGGGTTT GATAGGGCAA ATTATCAGTA AATTTGAACA AAAGGGTTAT AAAATTGTTG GTTTAAAAAT GATGCAAATA TCACGTGAAG TGGCAGAAAG GCATTATGGA GAACATGCAG GGAAACCCTT CTTTAACGGG CTGGTTGATT TTATTACCTC CGGTCCAGTG GTTGCCATGG TCATAGAGGG CAAGGATGTT GTTACCACTG CCAGAGAAAT GATGGGTGCC ACCAACCCAC TGAAGGCTGC CCCTGGTACT ATCCGCGCCA CCTTTGGGGT GGATGTAGGG CGTAATATTA TCCATGGATC AGACTCTTTA GAGAGTGCCC AAAGGGAAAT TGGAATTTTC TTTAAATCAG AAGAACTGAT AGACTACGAC CGTGCCATTG ACACCTGGAT CTATGAGTAA
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Protein sequence | MERTYLMVKP DGVQRGLIGQ IISKFEQKGY KIVGLKMMQI SREVAERHYG EHAGKPFFNG LVDFITSGPV VAMVIEGKDV VTTAREMMGA TNPLKAAPGT IRATFGVDVG RNIIHGSDSL ESAQREIGIF FKSEELIDYD RAIDTWIYE
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