Gene Dred_0116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0116 
Symbol 
ID4956154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp123170 
End bp123412 
Gene Length243 bp 
Protein Length80 aa 
Translation table11 
GC content40% 
IMG OID640179270 
ProductRNA-binding S4 domain-containing protein 
Protein accessionYP_001111491 
Protein GI134297995 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1188] Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGATTAG ACAAATTCCT CAAAGTCTCT AGGGTTATTA AACGCCGTAC TTTAGCCAAA 
GAAGTGTGTG ATGGTGGTCA TGTGCAGGTG AATAATCGTG CGGCTAAAGC GGGGCTTGAG
GTTAAGCCAG GAGATAAGGT TGAGATTAAT TTTGGCTCGA GAAAGCTGTC ATTTAAGATT
TTAGAAGTAA AGGAAACAGT TCCTGTAAAA GAGGCAGCAA GCCTTTACGA AATTATTGAG
TAA
 
Protein sequence
MRLDKFLKVS RVIKRRTLAK EVCDGGHVQV NNRAAKAGLE VKPGDKVEIN FGSRKLSFKI 
LEVKETVPVK EAASLYEIIE