Gene Dred_0109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0109 
Symbol 
ID4956652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand+ 
Start bp114376 
End bp114996 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content42% 
IMG OID640179263 
Productaminoacyl-tRNA hydrolase 
Protein accessionYP_001111484 
Protein GI134297988 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0193] Peptidyl-tRNA hydrolase 
TIGRFAM ID[TIGR00447] peptidyl-tRNA hydrolase 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.0000213906 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTGA TTGTGGGCCT GGGGAACCCT GGTACGGAGT ATGCAAAAAC CAGGCATAAT 
ATAGGGTTTA TGGTTATTGA TCGATTGGCA GATGAATCTA GGGTAAGTAC AGAAAAGAAT 
CAGCACAAAG CCCAGATCTG TCAGATTACT ATTGGGTCGG AAAAAGTTAT TTTGGCAAAA 
CCACAAACCT ATATGAATTT AAGTGGGCAG TCCGTTGTGG CTTTAATGAA TTGGTACAAA 
CTATCTCCGG ATGAATTGTT TGTTATTACC GATGATATGG ATTTACCGCC TGGAGTGTTG 
CGCATTCGTA AGAACGGCAG TGCCGGAGGA CAAAGGGGAC TAAAAAACAT TATTGAACTT 
TTAGGAACCC AGCAATTTCC TCGCATGAGG GTTGGTATTG GTCGACCGGA ACATGGTGCT 
GTGGATCATG TGTTGGGCAA GATCAGTGAG GCGGAGGCAG AATTAATTAA CCCGGCCATT 
CAGACCGCTG TGGAAGCTGT GAAAGTTTGG GTTTTAGAAG GAACCCAGGC CGCCATGAAT 
AAATTTAATC AAAAAAATAA AAAGAAAAAG GAAAAAGAAC AACCAGAAGC AGCAACGGAC 
CAACTATTAG AGAATAAATA A
 
Protein sequence
MKLIVGLGNP GTEYAKTRHN IGFMVIDRLA DESRVSTEKN QHKAQICQIT IGSEKVILAK 
PQTYMNLSGQ SVVALMNWYK LSPDELFVIT DDMDLPPGVL RIRKNGSAGG QRGLKNIIEL 
LGTQQFPRMR VGIGRPEHGA VDHVLGKISE AEAELINPAI QTAVEAVKVW VLEGTQAAMN 
KFNQKNKKKK EKEQPEAATD QLLENK