Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_0108 |
Symbol | |
ID | 4956685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 113676 |
End bp | 114308 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640179262 |
Product | ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 |
Protein accession | YP_001111483 |
Protein GI | 134297987 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000360091 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGATA CAGCTTTAAA TGCTAATTTA AGGAAAACGG CTACAAAATC CATTGTAAAA GAAATTAGAA ATAACGGGGG TATTCCAGGG GTGGTTTATG GTAAACATGT GGGTTCCATG GCTATTTCTG TGGATGCTAA AGATTTAAAG AATATTTTAG GTTCTGTAAC AGGGCGGAAC ACACTGATTA ATATGAACAT AAATGGTAGC AAACAGACCG TCATGGTTAA GAGTCTACAA ATGGATCCCA TGCATCAAAA TATACGACAT GTGGATTTTC AACAGGTATC GGAAAATACG AAAATACGGA CTGTTATTCC TGTTCAATTA GTAGGGACCC CAAAGGGCGT AGCAATGGGA GGCGTTATTC AACATGACCT GCGCAGTGCA GAAATAGAGT GCCTTCCCAA TCGAATTCCG GAGGCTATTC AAGTGGATAT CAGTGGGCTT GAGATTGGTG ATACCCTATC TGTAAGTGAT TTAAATTTAC CGCCAGGTGT TAAGATTTTA GATCACCCCC ATACGACTGT TGTTGGCTTA GCAACCATTA AGGCGCCTGA ACCAGCAGGT CAGCCAGAGG TACCGCCAGA ACCTGCGGAG GAAGCTAAGG CAAAAACCAT TGAAAAAGAG TAA
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Protein sequence | MADTALNANL RKTATKSIVK EIRNNGGIPG VVYGKHVGSM AISVDAKDLK NILGSVTGRN TLINMNINGS KQTVMVKSLQ MDPMHQNIRH VDFQQVSENT KIRTVIPVQL VGTPKGVAMG GVIQHDLRSA EIECLPNRIP EAIQVDISGL EIGDTLSVSD LNLPPGVKIL DHPHTTVVGL ATIKAPEPAG QPEVPPEPAE EAKAKTIEKE
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