Gene Dred_0105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0105 
Symbol 
ID4958338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp110962 
End bp111996 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content47% 
IMG OID640179259 
Productthreonine aldolase 
Protein accessionYP_001111480 
Protein GI134297984 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2008] Threonine aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0310789 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACCA TTCGAGTGGT AGATTTACGC AGTGACACCA TCACTTTGCC CACTGACGAA 
ATGAGAAAGG CCATGGCTAC CGCGGTGGTT GGTGACGATG TATACAAAGA AGACCCTACG
GTAAACCAGT TGGAAGAAAC TGCCGCTTCT TTGCTTGGAA AAGAAGCAGC TCTTTTTGTT
CCTTCTGGAA CCATGGGTAA CCAAATAGCA GTTTTAACCC ATACTGCCCG GGGTGAAGAG
GTCCTTCTGG ACAGCGAAGC CCATATTTAT TACTACGAAG TGGGCGGTCC TGCCATGCTG
GCCGGGGTGC AATTAAGACC GGTCAGTGAT TTATTAACAG ACCATGGCCC GGAAATTTTA
AAGGGTTCCT TGCGGGGAGA AGATCTCCAT TTTCCTCATA CGTCATTAAT TTGTTTAGAA
AATACCTTTA ATCGTGGTGG CGGCACCATC CTCTCTCCAC ACACCATGGG GAGGATTTAC
TCAATTGCCC AGGAACATAA CCTAAAGGTC CACGTGGACG GTGCCCGTAT TTTTAATGCA
GCCGTATCCC TCGGGGTAGA TGTTCGGACT TTTAGTCAGC ATTGTGATTC CCTCATGTTC
TGTCTTTCAA AGGGCTTGGC TGCACCAGTG GGTTCTTTGC TGGTTGGTAC ACGGCAGTTT
ATCGAACGAG CAAGAAAATA TCGCAAGGCT CTGGGGGGCG GCATGCGTCA AGCCGGTATT
CTGGCTGCCG CTGGTTTAGT TGCTTTGCAG AATGTGGACA GGCTTGCAGA AGATCATGCC
AACGCCCGGC GGTTGGCCGA AGGTCTGGCT AAATTACCGG GACTAGGTGT TGATTTGGCT
AAAGTACAAA CCAATATCAT CGTTGTAAAT GTAAATCAGC CGCGCTCTGC AGCAGATTTA
ACCATGGCAC TAAATAATAA AGGGATTAAA TGTTCCACCT TTGGTCCCTC CACCATCCGC
ATGGTTACTC ATATAAATGT TTCTAAAGAG GATATAGACT ATGCCTTAGG CATTGCTAAA
TATCTCTTGC AATAA
 
Protein sequence
MITIRVVDLR SDTITLPTDE MRKAMATAVV GDDVYKEDPT VNQLEETAAS LLGKEAALFV 
PSGTMGNQIA VLTHTARGEE VLLDSEAHIY YYEVGGPAML AGVQLRPVSD LLTDHGPEIL
KGSLRGEDLH FPHTSLICLE NTFNRGGGTI LSPHTMGRIY SIAQEHNLKV HVDGARIFNA
AVSLGVDVRT FSQHCDSLMF CLSKGLAAPV GSLLVGTRQF IERARKYRKA LGGGMRQAGI
LAAAGLVALQ NVDRLAEDHA NARRLAEGLA KLPGLGVDLA KVQTNIIVVN VNQPRSAADL
TMALNNKGIK CSTFGPSTIR MVTHINVSKE DIDYALGIAK YLLQ