Gene Dred_0104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0104 
Symbol 
ID4958502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp110490 
End bp110909 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content42% 
IMG OID640179258 
Productrubrerythrin 
Protein accessionYP_001111479 
Protein GI134297983 
COG category[S] Function unknown 
COG ID[COG1633] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.155346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTTAA CCATGAATGA TGTCTTAGAT GTAGCGATTA AATCTGAAGA AAGTAGTTAC 
CATTTTTACA AGGACATGGC AGTTAAAGCC CAGAACTCAG AGACCAAAAA AGTGTTAGAA
AAATTAGCCC AGGATGAGAA GGACCATCTG GAGTATCTAC TGTGGTTAAA GTCCGGCGAA
CCCATTAATG ACGAAGTTTA TTTTGATGGG TTTGAGGAAG CCGGGGAACT AAAACCAGAG
ATGACACCGA AGGAAGTTCT TACTATTGCC ATACAACGGG AAGATGCTGC TGCGAAAATG
TACAGCCAAA TGGCAGATAT CTTTAAAGGG CAACCAGAAA AGAAATTTAT CTTTGAGAGG
ATGGCCAGGG AAGAAGGCCA CCACGGCCAA GCAGTGACCC AGATGATGGA CCAGTTTTAA
 
Protein sequence
MHLTMNDVLD VAIKSEESSY HFYKDMAVKA QNSETKKVLE KLAQDEKDHL EYLLWLKSGE 
PINDEVYFDG FEEAGELKPE MTPKEVLTIA IQREDAAAKM YSQMADIFKG QPEKKFIFER
MAREEGHHGQ AVTQMMDQF