Gene Dred_0101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0101 
Symbol 
ID4958294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp107912 
End bp109111 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content47% 
IMG OID640179255 
Producthypothetical protein 
Protein accessionYP_001111476 
Protein GI134297980 
COG category[S] Function unknown 
COG ID[COG1900] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.235575 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGTTG AGAGAACCTA TGCGGAAATT AATGCCCGCA TTAAGGCCGG CAAAGCAGTG 
GTATTAACTG CAGAGGAAGT AATTGGCAAG GTAAAGGAGC AGGGGCTTAC CAAAACCGCT
GCGGAGGTAG ATGTGGTTAC CACAGGGACC TTTGGGCCCA TGTGCTCTTC GGGTGCCTTT
CTAAACTTTG GACACTCTTC TCCTCGGATG AGAATGACAA AGGTATCCCT TAATAATGTA
CCCGCTTATA CCGGGATTGC CGCTGTGGAT GCTTATATAG GGGCCACAGA AGTTCCCGAG
GATGACCCGG CCAACAGTAA TCACCCCGGG GAGTTTCGCT ATGGTGGAGG GCATGTTATT
GAGGATTTAG TAGCAGGTAA AACAGTAAAA TTGAAGGCCC TTTCCTATGG TACCGATTGT
TATCCCCGAC GGGAAATAGA AACAAACATT ACCCTAAATG ATTTAAATGA GGCCACTTTA
TTTAATCCCC GTAATGCATA CCAAAACTAT AACTGCGCTG TTAATGCCAG CGATCGAGTC
ATTCATACCT ATATGGGGAC CTTAAAGCCC AGGTTTGGCA ATGCAAACTA TTCTACCTCT
GGGCAGTTAA GTCCACTAAT GAAGGATCCT AACTTTGCCA CCATTGGCAT AGGAACACGG
ATTTTCCTGG GTGGGGGAAT TGGTTATGTG GTTTGGAATG GAACCCAGCA TTTCCCAGGT
TGGTTAAAGG ACCAAGAAGG CAATGTTGTT GGTTCAGCAG GTGGCACCCT TTCCGTTTTG
GGTGACCTTA AGCAGATGAA ACCCCAGTGG TTAAGGGGCA CTCGTTTCCA GGGCTATGGG
GCCACCCTAA CCGTTGGCTT AGGTGTACCG ATTCCAATAC TGAATGAAGA GATATTAAGG
TTTGCGGCAC TGTCCGATGA GGAATTGCAC GCTCCTGTGG TGGACTACAG TGATGCTTAT
CCCAATCGAG TTGGAGGTAA TCTGGGCGTA GTCAGTTATG CTCAACTGAA ATCCGGGAAA
ATTATTTTGG ATGGAAAGGA AATTCCCACA GCACCCCTAT CCAGTTATCC TAAGGCTCGG
GAAATTGCTG GACAATTAAA GAATTGGATA GAAAAGGGAG ACTTCTTGTT AGGTGAACCC
GTACAGCTAC TGCCAGGACC CATGGCAGGA CTCACCGGAA AGCCCCTAGA GATTAAATAA
 
Protein sequence
MSVERTYAEI NARIKAGKAV VLTAEEVIGK VKEQGLTKTA AEVDVVTTGT FGPMCSSGAF 
LNFGHSSPRM RMTKVSLNNV PAYTGIAAVD AYIGATEVPE DDPANSNHPG EFRYGGGHVI
EDLVAGKTVK LKALSYGTDC YPRREIETNI TLNDLNEATL FNPRNAYQNY NCAVNASDRV
IHTYMGTLKP RFGNANYSTS GQLSPLMKDP NFATIGIGTR IFLGGGIGYV VWNGTQHFPG
WLKDQEGNVV GSAGGTLSVL GDLKQMKPQW LRGTRFQGYG ATLTVGLGVP IPILNEEILR
FAALSDEELH APVVDYSDAY PNRVGGNLGV VSYAQLKSGK IILDGKEIPT APLSSYPKAR
EIAGQLKNWI EKGDFLLGEP VQLLPGPMAG LTGKPLEIK