Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_0092 |
Symbol | |
ID | 4958520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | - |
Start bp | 98298 |
End bp | 99665 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640179246 |
Product | amino acid carrier protein |
Protein accession | YP_001111467 |
Protein GI | 134297971 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1115] Na+/alanine symporter |
TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGATTTTG CAACCTTAGT AAGTGACATC AATGGTTTTG TCTGGGGTCC CTATATGCTA GCTTTACTTG TTGGTACCGG CATATTTCTG ACCCTACGGC TGGGTTTTCT TCAAGTAAGA ACCCTGCCCT ACGCCCTTAA ACTGGCCTTT TCTCCCAACA AACAGGACCA TAAGTCCGAA GGAGACATTT CCCACTTCCA TGCTTTGATG ACGGCTCTGG CCGCCACCAT TGGTACCGGT AATATTGCCG GTGTTGCTAC CGCCGTATTT ACCGGAGGTC CTGGGGCTGT TTTCTGGATG TGGGTAACCG CTTTCTTTGG TATGGCAACT AAGTACTCCG AGGCCATACT GGCAGTTAAA TACCGTATTG TTGACGAAAA GGGTGAAATG GCCGGGGGTC CCATGTATTA TATTGAACGG GGCTTGAAAA TGAAATGGCT GGGTTGGCTA TTTGCCTTCT TTGGCGCCTT TGCTTCCTTT GGTATCGGCA ATATGACCCA AACGAACTCT GTGGCCCTTG CTATGAATGG TACCTTTGGT GTCAGTCCGA TTATTACGGG TATTATCTTA GCAATTTTAA CCGGTGCTGT TATCCTAGGA GGTATCCAAA GCATCGGTCG TGTTACAGGT CTGGTGGTTC CCTTTATGGC TATTTTCTAC GTACTTGGCG GGCTGGCTAT TATTGCAATG AACTTAGATA AATTAGTTCC TGCAGTTTCC TTAATATTGA ATGACGCCTT CAGCGGTCAG GCTGTGGCTG GTGGTGCACT GGGTACCGTC ATCCGCTACG GAGTAGCCCG TGGGGTCTTC TCCAATGAAG CCGGTTTAGG TTCTGCTCCC ATTGCCGCTG CTGCCGCTAA AACAGACCAC CCTGGACGTC AGGCCCTGGT ATCCATGACG GGTACCTTCC TGGATACCAT TATTGTCTGT TCCATCACAG GTATTGTATT AACAATGTCT GGCCTCTACT CAGGTGAAGT ATCCGGTGCA GAGTTAACCA TTGCTGCCTT TGACTCCTTC CTCCCCGGTA TGGGTAAATA CATTGTTAGT ATCGGTCTTA TCTTCTTTGC CTACTCCACG GTATTGGGCT GGTCCTATTA CGGTGAAAAA TGTTTCCAAT ACATTTTTAG CCGTAAAGCT GTTAAATATT ATCGTTATGC CTTTGTAGTT GCGGCCTTTG TCGGCTGCAC CTTGGAATTA GACTTGGTTT GGAACATTGC CGATACTTTA AACGGTGCCA TGGCCATTCC CAACCTAATT GGTTTACTGG GTCTTTCCGG TGTAATAGCT GCTGAAACTA AGGACTTTAT GGCCCTTCGG GCGCGCGAAT TAGAAGCTGA ACGGTTCGGT AAAGACCTAG GTGCCTAA
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Protein sequence | MDFATLVSDI NGFVWGPYML ALLVGTGIFL TLRLGFLQVR TLPYALKLAF SPNKQDHKSE GDISHFHALM TALAATIGTG NIAGVATAVF TGGPGAVFWM WVTAFFGMAT KYSEAILAVK YRIVDEKGEM AGGPMYYIER GLKMKWLGWL FAFFGAFASF GIGNMTQTNS VALAMNGTFG VSPIITGIIL AILTGAVILG GIQSIGRVTG LVVPFMAIFY VLGGLAIIAM NLDKLVPAVS LILNDAFSGQ AVAGGALGTV IRYGVARGVF SNEAGLGSAP IAAAAAKTDH PGRQALVSMT GTFLDTIIVC SITGIVLTMS GLYSGEVSGA ELTIAAFDSF LPGMGKYIVS IGLIFFAYST VLGWSYYGEK CFQYIFSRKA VKYYRYAFVV AAFVGCTLEL DLVWNIADTL NGAMAIPNLI GLLGLSGVIA AETKDFMALR ARELEAERFG KDLGA
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