Gene Dred_0092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0092 
Symbol 
ID4958520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp98298 
End bp99665 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content48% 
IMG OID640179246 
Productamino acid carrier protein 
Protein accessionYP_001111467 
Protein GI134297971 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1115] Na+/alanine symporter 
TIGRFAM ID[TIGR00835] amino acid carrier protein 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATTTTG CAACCTTAGT AAGTGACATC AATGGTTTTG TCTGGGGTCC CTATATGCTA 
GCTTTACTTG TTGGTACCGG CATATTTCTG ACCCTACGGC TGGGTTTTCT TCAAGTAAGA
ACCCTGCCCT ACGCCCTTAA ACTGGCCTTT TCTCCCAACA AACAGGACCA TAAGTCCGAA
GGAGACATTT CCCACTTCCA TGCTTTGATG ACGGCTCTGG CCGCCACCAT TGGTACCGGT
AATATTGCCG GTGTTGCTAC CGCCGTATTT ACCGGAGGTC CTGGGGCTGT TTTCTGGATG
TGGGTAACCG CTTTCTTTGG TATGGCAACT AAGTACTCCG AGGCCATACT GGCAGTTAAA
TACCGTATTG TTGACGAAAA GGGTGAAATG GCCGGGGGTC CCATGTATTA TATTGAACGG
GGCTTGAAAA TGAAATGGCT GGGTTGGCTA TTTGCCTTCT TTGGCGCCTT TGCTTCCTTT
GGTATCGGCA ATATGACCCA AACGAACTCT GTGGCCCTTG CTATGAATGG TACCTTTGGT
GTCAGTCCGA TTATTACGGG TATTATCTTA GCAATTTTAA CCGGTGCTGT TATCCTAGGA
GGTATCCAAA GCATCGGTCG TGTTACAGGT CTGGTGGTTC CCTTTATGGC TATTTTCTAC
GTACTTGGCG GGCTGGCTAT TATTGCAATG AACTTAGATA AATTAGTTCC TGCAGTTTCC
TTAATATTGA ATGACGCCTT CAGCGGTCAG GCTGTGGCTG GTGGTGCACT GGGTACCGTC
ATCCGCTACG GAGTAGCCCG TGGGGTCTTC TCCAATGAAG CCGGTTTAGG TTCTGCTCCC
ATTGCCGCTG CTGCCGCTAA AACAGACCAC CCTGGACGTC AGGCCCTGGT ATCCATGACG
GGTACCTTCC TGGATACCAT TATTGTCTGT TCCATCACAG GTATTGTATT AACAATGTCT
GGCCTCTACT CAGGTGAAGT ATCCGGTGCA GAGTTAACCA TTGCTGCCTT TGACTCCTTC
CTCCCCGGTA TGGGTAAATA CATTGTTAGT ATCGGTCTTA TCTTCTTTGC CTACTCCACG
GTATTGGGCT GGTCCTATTA CGGTGAAAAA TGTTTCCAAT ACATTTTTAG CCGTAAAGCT
GTTAAATATT ATCGTTATGC CTTTGTAGTT GCGGCCTTTG TCGGCTGCAC CTTGGAATTA
GACTTGGTTT GGAACATTGC CGATACTTTA AACGGTGCCA TGGCCATTCC CAACCTAATT
GGTTTACTGG GTCTTTCCGG TGTAATAGCT GCTGAAACTA AGGACTTTAT GGCCCTTCGG
GCGCGCGAAT TAGAAGCTGA ACGGTTCGGT AAAGACCTAG GTGCCTAA
 
Protein sequence
MDFATLVSDI NGFVWGPYML ALLVGTGIFL TLRLGFLQVR TLPYALKLAF SPNKQDHKSE 
GDISHFHALM TALAATIGTG NIAGVATAVF TGGPGAVFWM WVTAFFGMAT KYSEAILAVK
YRIVDEKGEM AGGPMYYIER GLKMKWLGWL FAFFGAFASF GIGNMTQTNS VALAMNGTFG
VSPIITGIIL AILTGAVILG GIQSIGRVTG LVVPFMAIFY VLGGLAIIAM NLDKLVPAVS
LILNDAFSGQ AVAGGALGTV IRYGVARGVF SNEAGLGSAP IAAAAAKTDH PGRQALVSMT
GTFLDTIIVC SITGIVLTMS GLYSGEVSGA ELTIAAFDSF LPGMGKYIVS IGLIFFAYST
VLGWSYYGEK CFQYIFSRKA VKYYRYAFVV AAFVGCTLEL DLVWNIADTL NGAMAIPNLI
GLLGLSGVIA AETKDFMALR ARELEAERFG KDLGA