Gene Dred_0089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0089 
Symbol 
ID4957935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp96023 
End bp97129 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content47% 
IMG OID640179243 
Productpeptidase S8/S53 subtilisin kexin sedolisin 
Protein accessionYP_001111464 
Protein GI134297968 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1404] Subtilisin-like serine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGGTA GAAATACCCG TGTAAGAATC ATATTATTTA AGGATCAGCT CCACCGTGGT 
GACTTGACCC CGCCCCATAT GGGTTTGATT AATTGGATGG GAGCACAGAA TGTCCGTGCC
TTACCAAATG TAAACGGTGT GATCTGTACT CTGTCGCCGA AGATTACAGA CCAGGAGATT
CTTTCCACTG GTGGAGTGGT GGCGGTAGAA GAAAATTGTA AGATTAGTTT GGTACCTTGG
GCACCTATAA AGTTTAAACC ATTTTCAGAG CAAATTATTC CCTGGGGGGT TCATTATATC
GGGTCCGATG TGTGTTGGTC AGAGACCCGG GGGCAGGGGG TTAGGATTGC AGTCATTGAC
AGTGGCATTG ACAACAATCA TGCCAATCTA AGGAATAACC TTCGGGGAGG CAAGAACTTT
ATAGCCCCTG AAGCATCCTA TCATGATGAT AATGGTCACG GCACCCATGT GGCAGGCATC
ATAGCCGCAG CTGACATTGG AAAGGGAGTT CTTGGCGTGG CTCCTGAGGC AGAGATCTAT
GCCTTAAAGG TACTGGATCA ATGGGGTGAC GGAACTATAC TTAATGCAAT CAATGCCATT
AATTGGTGTC TACAAAAGAA CATTCACATT GCCAATATGA GCTTTGGCAC CGACAAATAT
AGTCGAGCAT TGGAGGAGGC TGTTCGGGTA GCCTGCAGTC GAGGCCTATT AATTGTTGCG
GCAGCTGGCA ATGATGGTGG CCCGGGTACG GTTGACTACC CTGCGGTTTT TAAGGAGACT
CTCAGTGTTG CCGCACTGGA TACAAAGGGA AATTTAGCTG ATTTCAGCAG CAGTGGATCA
GAGGTGGATT TATTGGCCCC GGGCAGTAAT ATTTTATCAA CCTATCGCTG GGGCACCTAT
GTGCGGTTAA GTGGTAGTTC CATGGCAGCA GCACACACTG CCGGTGCTGC AGCTCTATTG
AGAGCAAAAT ACCCTTATGA AGATATTCAT ATGATTGCCA GACGTTTAAT GGCCGGGGCA
ATGAAAATTA AGGAAAAGGA CGGTCAATTA ACCGGAGCTG GTGTTGTAAG GGTTGATGTT
TCGTTAAAAT CTTACCCGGG GGCATAA
 
Protein sequence
MGGRNTRVRI ILFKDQLHRG DLTPPHMGLI NWMGAQNVRA LPNVNGVICT LSPKITDQEI 
LSTGGVVAVE ENCKISLVPW APIKFKPFSE QIIPWGVHYI GSDVCWSETR GQGVRIAVID
SGIDNNHANL RNNLRGGKNF IAPEASYHDD NGHGTHVAGI IAAADIGKGV LGVAPEAEIY
ALKVLDQWGD GTILNAINAI NWCLQKNIHI ANMSFGTDKY SRALEEAVRV ACSRGLLIVA
AAGNDGGPGT VDYPAVFKET LSVAALDTKG NLADFSSSGS EVDLLAPGSN ILSTYRWGTY
VRLSGSSMAA AHTAGAAALL RAKYPYEDIH MIARRLMAGA MKIKEKDGQL TGAGVVRVDV
SLKSYPGA