Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_0076 |
Symbol | |
ID | 4956693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 82393 |
End bp | 83040 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640179230 |
Product | thiamine-phosphate pyrophosphorylase |
Protein accession | YP_001111451 |
Protein GI | 134297955 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0352] Thiamine monophosphate synthase |
TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0077197 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCCGACA AAAGGCAGGT TCAGGAACTT TTCAACACAG GTCTCTATGG GATTACCGCT GAAGAATATT CCCTGGGTAG AAGCAATTAT GCAGTGATTA AGGCTATGAT TAATGCAGGG ATAAAGGTCA TACAGTACAG AGAGAAGGAA AAGAAGCTGC GGGAAAAGTA CCAGGAATGC CTGGATATAA GGAAATTAAC GCAGCAAGCT GGAGTAACCT TCATAGTAAA TGACCACATT GATTTGGCAT TAATGGTAGG TGCCGATGGT GTACACATTG GACAAGATGA TTTACCACCG GAAAAGGTTC GTCAACTGGT GGGGGAAAAA ATGATTATTG GTCTTTCCAC CCATTCTCCA CTTCAGGCCC AGGCAGCGTT GGCAGCGGGT GTGGACTATA TCGGAGTGGG GCCCATATTT GCTACCCGGA CCAAAAAGGA TGTTTGCCAA CCGGTGGGGT TGGAGTATCT GGAGTATGTT GTTAAAAATA TTCCCCTTCC CTTTGTGGCC ATTGGTGGTA TAAAAGAACA CAATCTATCC GAGGTGTCTA AACGTGGGGC CCAATGTGCG GCCCTGGTAA CAGAAATTGT AGGGGCAAAG GATATTGTTG AGAAAGTGCA TTCCCTTAGG AAAAGAATAA ATATCTAA
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Protein sequence | MADKRQVQEL FNTGLYGITA EEYSLGRSNY AVIKAMINAG IKVIQYREKE KKLREKYQEC LDIRKLTQQA GVTFIVNDHI DLALMVGADG VHIGQDDLPP EKVRQLVGEK MIIGLSTHSP LQAQAALAAG VDYIGVGPIF ATRTKKDVCQ PVGLEYLEYV VKNIPLPFVA IGGIKEHNLS EVSKRGAQCA ALVTEIVGAK DIVEKVHSLR KRINI
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