Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_0060 |
Symbol | |
ID | 4958646 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 68217 |
End bp | 69224 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640179214 |
Product | DNA polymerase III, delta prime subunit |
Protein accession | YP_001111435 |
Protein GI | 134297939 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit [TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0492451 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTGTAGGT TAAGTAATAT AATTGGTCAT CAGCAAATAA TCCAGACGCT GAAGAACGCA GTTCAAAAAT CCCGTGTAGC CCATGCCTAT TTGTTTATGG GGCCACCAGG CATTGGTAAG CAAACCGTTG CACGGAGTTT TGCACAAGTT CTTCTATGTG AAGCCCCCCA AGGGGGCGAT GCCTGTGGCA ACTGCAAATC ATGTCGCCAG ACTGACGGAG GTAATCATCC GGATTTGCAT TTATTAAGAC CCTCTGGGGT AACAATAAAA ATTGAGCAGA TAAGGGAACT ACAACGACAG GTACAGTATA AGCCCTATCA AGGAATAAGA CATGTTTTTA TTCTGGAAAA GTCAGAAACC ATGACCCAGG AAGCGGCAAA CTGCTTTCTT AAAACGCTGG AAGAACCGGG AAGTGCCACA GTATTTATTC TTTTAAGTGA CCAACCCTAT GGCCTGCTAC CCACGATTCT TTCTCGTTGT CAGCAGCTTC AGTTTCGTTC CTTGAGCAAC CAGGAGGTAA GCGAAGGGTT AAGGGTTCTT TGCCAAGTAG CAAGGGATCG TGCCGAAGAG CTAGCCCCGT TGGCCAGTGG AAGTATAGGA CGGGCCATAC AATTGGCGGG GGGAGAAGAT CAATGGCCCT TGCGGGAAAA AGCTCTTTGG TTGGTCCAGC GATTTCCTCA GATGAGTCAA TATCAAGCCC TGCAGGCTGC AGAGGAATTA TCCAATGATC GAAGTGCTGC AGTGGAAGCT CTAGAAATTA TGCTACTGTG GTTTAGGGAT TTGTTAGTTT ATCATTACAC AAGACAAAAA GAGATACTCA TAAATCAAGA CAAAATTGAT ACTCTTTTAG AACAGGAAAA CTGGTATGCT CCGTCCAAAG TAGTGGAAAT AATTGAAGAA ATAAAATTAG CTAAGGAAAG ACTTATGGCC AATGCAAATA CCCGTATGGC CTTAGAGGTT ATGATGTTGA AAATAAACTC CTATGGAGGA AACAACGATG TCGGTTAG
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Protein sequence | MCRLSNIIGH QQIIQTLKNA VQKSRVAHAY LFMGPPGIGK QTVARSFAQV LLCEAPQGGD ACGNCKSCRQ TDGGNHPDLH LLRPSGVTIK IEQIRELQRQ VQYKPYQGIR HVFILEKSET MTQEAANCFL KTLEEPGSAT VFILLSDQPY GLLPTILSRC QQLQFRSLSN QEVSEGLRVL CQVARDRAEE LAPLASGSIG RAIQLAGGED QWPLREKALW LVQRFPQMSQ YQALQAAEEL SNDRSAAVEA LEIMLLWFRD LLVYHYTRQK EILINQDKID TLLEQENWYA PSKVVEIIEE IKLAKERLMA NANTRMALEV MMLKINSYGG NNDVG
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