Gene Dred_0060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0060 
Symbol 
ID4958646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp68217 
End bp69224 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content44% 
IMG OID640179214 
ProductDNA polymerase III, delta prime subunit 
Protein accessionYP_001111435 
Protein GI134297939 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit
[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0492451 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTGTAGGT TAAGTAATAT AATTGGTCAT CAGCAAATAA TCCAGACGCT GAAGAACGCA 
GTTCAAAAAT CCCGTGTAGC CCATGCCTAT TTGTTTATGG GGCCACCAGG CATTGGTAAG
CAAACCGTTG CACGGAGTTT TGCACAAGTT CTTCTATGTG AAGCCCCCCA AGGGGGCGAT
GCCTGTGGCA ACTGCAAATC ATGTCGCCAG ACTGACGGAG GTAATCATCC GGATTTGCAT
TTATTAAGAC CCTCTGGGGT AACAATAAAA ATTGAGCAGA TAAGGGAACT ACAACGACAG
GTACAGTATA AGCCCTATCA AGGAATAAGA CATGTTTTTA TTCTGGAAAA GTCAGAAACC
ATGACCCAGG AAGCGGCAAA CTGCTTTCTT AAAACGCTGG AAGAACCGGG AAGTGCCACA
GTATTTATTC TTTTAAGTGA CCAACCCTAT GGCCTGCTAC CCACGATTCT TTCTCGTTGT
CAGCAGCTTC AGTTTCGTTC CTTGAGCAAC CAGGAGGTAA GCGAAGGGTT AAGGGTTCTT
TGCCAAGTAG CAAGGGATCG TGCCGAAGAG CTAGCCCCGT TGGCCAGTGG AAGTATAGGA
CGGGCCATAC AATTGGCGGG GGGAGAAGAT CAATGGCCCT TGCGGGAAAA AGCTCTTTGG
TTGGTCCAGC GATTTCCTCA GATGAGTCAA TATCAAGCCC TGCAGGCTGC AGAGGAATTA
TCCAATGATC GAAGTGCTGC AGTGGAAGCT CTAGAAATTA TGCTACTGTG GTTTAGGGAT
TTGTTAGTTT ATCATTACAC AAGACAAAAA GAGATACTCA TAAATCAAGA CAAAATTGAT
ACTCTTTTAG AACAGGAAAA CTGGTATGCT CCGTCCAAAG TAGTGGAAAT AATTGAAGAA
ATAAAATTAG CTAAGGAAAG ACTTATGGCC AATGCAAATA CCCGTATGGC CTTAGAGGTT
ATGATGTTGA AAATAAACTC CTATGGAGGA AACAACGATG TCGGTTAG
 
Protein sequence
MCRLSNIIGH QQIIQTLKNA VQKSRVAHAY LFMGPPGIGK QTVARSFAQV LLCEAPQGGD 
ACGNCKSCRQ TDGGNHPDLH LLRPSGVTIK IEQIRELQRQ VQYKPYQGIR HVFILEKSET
MTQEAANCFL KTLEEPGSAT VFILLSDQPY GLLPTILSRC QQLQFRSLSN QEVSEGLRVL
CQVARDRAEE LAPLASGSIG RAIQLAGGED QWPLREKALW LVQRFPQMSQ YQALQAAEEL
SNDRSAAVEA LEIMLLWFRD LLVYHYTRQK EILINQDKID TLLEQENWYA PSKVVEIIEE
IKLAKERLMA NANTRMALEV MMLKINSYGG NNDVG