Gene Dred_0059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0059 
Symbol 
ID4958628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand+ 
Start bp67601 
End bp68224 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content47% 
IMG OID640179213 
ProductdTMP kinase 
Protein accessionYP_001111434 
Protein GI134297938 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.804352 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCACTGA TTTTCATTGT GTTTGAAGGT GTGGATGGTT CAGGTAAAAG CACCCAGCTA 
AACCTGTTAA ATAAATACCT TTCCCAGAAG GAGATAAAAA CCATATGTAC CCGGGAACCT 
GGAGGTACTC CAGTGGGGGA AAAAATACGT GAACTTCTGC TGGACCCAAA CTTTGCAGAA 
ATACAGGATC GAACTGAGGC CCTATTGTAC TCTGCGGCTA GGGCACAGTT GGTTGCTCAA 
GTGATTCGAC CACAGTTGGA GCAGGGAACC GTGGTACTTT GCGATCGTTA TATTGATTCC 
ACCTTGGCTT ATCAGGGTTA TGGCAGAGGG ATGGATATTT CCTTTTTAGC TCAGATCAAT 
GAGTTAGCCA GCGGTGGATT GATGCCAAAT ATTACTATAT TACTAGATTT ACCACCTGAG 
GAGGGTCTTC AACGGTCCCG TAAGGATCGG CCTGCGGATA GGCTGGAAAA TGAATCCCTA 
ACATTTTATC ATAAAGTTCG TAGTGGCTAT CTGGAGATGG CCAAGAGAAA ACCGGATACT 
TACCTGGTGT TGGATGCCAG GCAGACCATG GAGCAACTGC ACAGACAAAT TTGCTGCCGC 
GTGGGTGGGT TGCTTGGTGT GTAG
 
Protein sequence
MALIFIVFEG VDGSGKSTQL NLLNKYLSQK EIKTICTREP GGTPVGEKIR ELLLDPNFAE 
IQDRTEALLY SAARAQLVAQ VIRPQLEQGT VVLCDRYIDS TLAYQGYGRG MDISFLAQIN 
ELASGGLMPN ITILLDLPPE EGLQRSRKDR PADRLENESL TFYHKVRSGY LEMAKRKPDT 
YLVLDARQTM EQLHRQICCR VGGLLGV