Gene Dred_0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0048 
Symbol 
ID4956435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp58074 
End bp58847 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content49% 
IMG OID640179202 
Productthiamine pyrophosphate binding domain-containing protein 
Protein accessionYP_001111423 
Protein GI134297927 
COG category[C] Energy production and conversion 
COG ID[COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGTGT CTCCACAGCC TGCCATGCCT AAAAGCTGGC GTGTAGAAAG TAAGCCCCAT 
AAATTCTGTC CCGGTTGCGG CCACGGCCTG GTATTAAAAT GCCTGGGTGA AGCCATTGAT
GAACTGGGTA TTCAAGATAA AGTCGTATTC GGATGTGACA TTGGATGTTC TTTGCTGTCC
TGGGATTTCT TCAACTGTGA CAGTGTACAA ACCCACCACG GTCGTACCAC CCCGGTAATG
ACCGGTATCA AGCGTGCAAA TCCCGACGCG ATCTGTGTAG CTTACATGGG TGATGGCGGC
GGTTATGCCA TTGGTATTGG CGGTATTGTT AACGCTGCTG CCCGTAACGA GAAAGTAACT
GTACTGCTGG CCAACAACAC CGTTTATGCC ATGACCGGTG GTCAGATGTC CCCCTGTACC
ATGCCTGGAC AAAAGGTTGA AACAGCTCCC TATGGACGTG ACCCTGAAGC AACTGGTATG
CCCACCCAGG GACCTGAAAT GATCTCTGCC ATCACTGGAG ACGGTGCCTA TGTTGCCCGC
GGTACCACTT CTAACTTAAA GCAATTAAAG AGTTATATTA AAAAAGCGCT ACAAAACCAA
ATGGAAGGCA ACGGCTTCTC CTTCGTAGAA GCACTGGCTG GCTGTCCCAC CAACTGGCGG
ACCAATGCTG AGAAGACCTG GGCCTTTATT GAAAAAGAAA TGCCTCAGTA CTATAAAGTA
GGGGAAAAGA AAAATCCCTT TGAGGCTAAA AAGGAGGCTC AGCAGAATGG CTAA
 
Protein sequence
MSVSPQPAMP KSWRVESKPH KFCPGCGHGL VLKCLGEAID ELGIQDKVVF GCDIGCSLLS 
WDFFNCDSVQ THHGRTTPVM TGIKRANPDA ICVAYMGDGG GYAIGIGGIV NAAARNEKVT
VLLANNTVYA MTGGQMSPCT MPGQKVETAP YGRDPEATGM PTQGPEMISA ITGDGAYVAR
GTTSNLKQLK SYIKKALQNQ MEGNGFSFVE ALAGCPTNWR TNAEKTWAFI EKEMPQYYKV
GEKKNPFEAK KEAQQNG